Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SSR1P43307 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSR1P43307 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSR1P43307 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
SSR1P43307 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSR1P43307 GTF2H2B-203ENST00000508065 1432 ntBASIC3.98□□□□□ -1.77
SSR1P43307 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSR1P43307 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSR1P43307 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.98□□□□□ -1.77
SSR1P43307 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.98□□□□□ -1.77
SSR1P43307 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.98□□□□□ -1.77
SSR1P43307 RPL34P26-201ENST00000445636 354 ntBASIC3.98□□□□□ -1.77
SSR1P43307 AC006539.3-201ENST00000454258 129 ntBASIC3.98□□□□□ -1.77
SSR1P43307 AC084198.1-201ENST00000477747 402 ntBASIC3.98□□□□□ -1.77
SSR1P43307 RPL23AP55-201ENST00000498163 452 ntBASIC3.98□□□□□ -1.77
SSR1P43307 AC108941.1-201ENST00000502853 530 ntBASIC3.98□□□□□ -1.77
SSR1P43307 RAC1P2-201ENST00000511164 579 ntBASIC3.98□□□□□ -1.77
SSR1P43307 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.98□□□□□ -1.77
SSR1P43307 AC004923.2-201ENST00000529649 369 ntBASIC3.98□□□□□ -1.77
SSR1P43307 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.98□□□□□ -1.77
SSR1P43307 OR8L1P-201ENST00000534005 955 ntBASIC3.98□□□□□ -1.77
SSR1P43307 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.98□□□□□ -1.77
SSR1P43307 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.98□□□□□ -1.77
SSR1P43307 MTND4LP24-201ENST00000572277 291 ntBASIC3.98□□□□□ -1.77
SSR1P43307 AP000919.1-202ENST00000581139 1264 ntBASIC3.98□□□□□ -1.77
SSR1P43307 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.98□□□□□ -1.77
SSR1P43307 AL137849.1-201ENST00000604767 169 ntBASIC3.98□□□□□ -1.77
SSR1P43307 AL590392.1-201ENST00000604960 446 ntBASIC3.98□□□□□ -1.77
SSR1P43307 AC019176.2-201ENST00000611579 315 ntBASIC3.98□□□□□ -1.77
SSR1P43307 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.98□□□□□ -1.77
SSR1P43307 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SSR1P43307 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSR1P43307 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSR1P43307 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSR1P43307 FAM35CP-201ENST00000554755 2470 ntBASIC3.98□□□□□ -1.77
SSR1P43307 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.98□□□□□ -1.77
SSR1P43307 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSR1P43307 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.97□□□□□ -1.77
SSR1P43307 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSR1P43307 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.97□□□□□ -1.77
SSR1P43307 RPL7P26-201ENST00000333817 754 ntBASIC3.97□□□□□ -1.77
SSR1P43307 RNA5SP391-201ENST00000363456 119 ntBASIC3.97□□□□□ -1.77
SSR1P43307 RNA5SP283-201ENST00000365604 119 ntBASIC3.97□□□□□ -1.77
SSR1P43307 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSR1P43307 DYNLT3P1-201ENST00000378574 347 ntBASIC3.97□□□□□ -1.77
SSR1P43307 RNU1-13P-201ENST00000384499 162 ntBASIC3.97□□□□□ -1.77
SSR1P43307 MIR199A2-201ENST00000385289 110 ntBASIC3.97□□□□□ -1.77
SSR1P43307 ATP5F1P4-201ENST00000397288 746 ntBASIC3.97□□□□□ -1.77
SSR1P43307 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSR1P43307 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSR1P43307 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.97□□□□□ -1.77
SSR1P43307 AC241520.1-201ENST00000422654 1099 ntBASIC3.97□□□□□ -1.77
SSR1P43307 FO393419.3-201ENST00000428741 282 ntBASIC3.97□□□□□ -1.77
SSR1P43307 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.97□□□□□ -1.77
SSR1P43307 MTND4LP7-201ENST00000431728 294 ntBASIC3.97□□□□□ -1.77
SSR1P43307 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.97□□□□□ -1.77
SSR1P43307 CYCSP53-201ENST00000455540 265 ntBASIC3.97□□□□□ -1.77
SSR1P43307 OR9M1P-201ENST00000459641 921 ntBASIC3.97□□□□□ -1.77
SSR1P43307 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.97□□□□□ -1.77
SSR1P43307 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.97□□□□□ -1.77
SSR1P43307 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SSR1P43307 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.97□□□□□ -1.77
SSR1P43307 RN7SKP83-201ENST00000516512 178 ntBASIC3.97□□□□□ -1.77
SSR1P43307 IGKV2-36-201ENST00000519999 223 ntBASIC3.97□□□□□ -1.77
SSR1P43307 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.97□□□□□ -1.77
SSR1P43307 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.97□□□□□ -1.77
SSR1P43307 AL049870.4-201ENST00000555741 486 ntBASIC3.97□□□□□ -1.77
SSR1P43307 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.97□□□□□ -1.77
SSR1P43307 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.97□□□□□ -1.77
SSR1P43307 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.97□□□□□ -1.77
SSR1P43307 MTATP6P25-201ENST00000574491 261 ntBASIC3.97□□□□□ -1.77
SSR1P43307 PCNAP1-202ENST00000595299 752 ntBASIC3.97□□□□□ -1.77
SSR1P43307 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSR1P43307 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
SSR1P43307 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSR1P43307 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.96□□□□□ -1.78
SSR1P43307 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
SSR1P43307 RNU6-98P-201ENST00000384173 107 ntBASIC3.96□□□□□ -1.78
SSR1P43307 MIR142-201ENST00000384835 87 ntBASIC3.96□□□□□ -1.78
SSR1P43307 AL354719.1-201ENST00000406535 843 ntBASIC3.96□□□□□ -1.78
SSR1P43307 OR8F1P-201ENST00000425243 930 ntBASIC3.96□□□□□ -1.78
SSR1P43307 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.96□□□□□ -1.78
SSR1P43307 HIGD1AP12-201ENST00000427832 281 ntBASIC3.96□□□□□ -1.78
SSR1P43307 AL590623.1-201ENST00000427864 105 ntBASIC3.96□□□□□ -1.78
SSR1P43307 TRIM60P13-201ENST00000432350 1283 ntBASIC3.96□□□□□ -1.78
SSR1P43307 OR4C10P-201ENST00000434991 931 ntBASIC3.96□□□□□ -1.78
SSR1P43307 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.96□□□□□ -1.78
SSR1P43307 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.96□□□□□ -1.78
SSR1P43307 AL161747.1-201ENST00000480068 358 ntBASIC3.96□□□□□ -1.78
SSR1P43307 RN7SL323P-201ENST00000494712 295 ntBASIC3.96□□□□□ -1.78
SSR1P43307 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.96□□□□□ -1.78
SSR1P43307 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.96□□□□□ -1.78
SSR1P43307 AF279873.1-201ENST00000523393 313 ntBASIC3.96□□□□□ -1.78
SSR1P43307 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.96□□□□□ -1.78
SSR1P43307 AC092747.2-201ENST00000545069 983 ntBASIC3.96□□□□□ -1.78
SSR1P43307 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSR1P43307 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.96□□□□□ -1.78
SSR1P43307 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.96□□□□□ -1.78
SSR1P43307 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.96□□□□□ -1.78
SSR1P43307 SUMO2P14-201ENST00000604488 293 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms