Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC020923.1-201ENST00000624021 917 ntBASIC3.61□□□□□ -1.83
SHMT2P34897 AC020978.9-201ENST00000624380 1141 ntBASIC3.61□□□□□ -1.83
SHMT2P34897 AL356094.1-201ENST00000624663 1212 ntBASIC3.61□□□□□ -1.83
SHMT2P34897 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.61□□□□□ -1.83
SHMT2P34897 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
SHMT2P34897 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHMT2P34897 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SHMT2P34897 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHMT2P34897 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHMT2P34897 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHMT2P34897 AP001486.2-201ENST00000561652 5113 ntBASIC3.61□□□□□ -1.83
SHMT2P34897 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.61□□□□□ -1.83
SHMT2P34897 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHMT2P34897 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.6□□□□□ -1.83
SHMT2P34897 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SHMT2P34897 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SHMT2P34897 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHMT2P34897 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHMT2P34897 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHMT2P34897 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHMT2P34897 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.6□□□□□ -1.83
SHMT2P34897 AC007066.1-201ENST00000392902 381 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.6□□□□□ -1.83
SHMT2P34897 AC005189.1-201ENST00000431286 310 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 BMS1P19-201ENST00000433925 393 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 AC092685.1-201ENST00000447960 1243 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.6□□□□□ -1.83
SHMT2P34897 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.6□□□□□ -1.83
SHMT2P34897 ANP32BP2-201ENST00000454525 545 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 UBDP1-202ENST00000457888 382 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 AC098799.1-201ENST00000504752 800 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 OR7E13P-201ENST00000526052 910 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.6□□□□□ -1.83
SHMT2P34897 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.6□□□□□ -1.83
SHMT2P34897 OR4U1P-201ENST00000554958 912 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 AC009101.1-201ENST00000568135 242 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.6□□□□□ -1.83
SHMT2P34897 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHMT2P34897 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
SHMT2P34897 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHMT2P34897 RNU1-30P-201ENST00000606575 163 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 OR2BH1P-201ENST00000608850 864 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.6□□□□□ -1.83
SHMT2P34897 AL121772.2-201ENST00000614331 297 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHMT2P34897 CR392039.5-201ENST00000623201 510 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.6□□□□□ -1.83
SHMT2P34897 CFTRP2-201ENST00000634304 199 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.6□□□□□ -1.83
SHMT2P34897 AP000553.6-201ENST00000641242 118 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHMT2P34897 AC025125.1-201ENST00000624743 1922 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 HSPA8P19-201ENST00000505359 1517 ntBASIC3.6□□□□□ -1.83
SHMT2P34897 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.59□□□□□ -1.83
SHMT2P34897 PTMAP2-201ENST00000397627 327 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.59□□□□□ -1.83
SHMT2P34897 AC019070.1-201ENST00000415008 1024 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.59□□□□□ -1.83
SHMT2P34897 VN1R42P-201ENST00000424651 344 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.59□□□□□ -1.83
SHMT2P34897 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.59□□□□□ -1.83
SHMT2P34897 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.59□□□□□ -1.83
SHMT2P34897 Z95327.1-201ENST00000446082 482 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.59□□□□□ -1.83
SHMT2P34897 AC004801.2-202ENST00000463559 283 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 AC018635.1-201ENST00000468292 1030 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 AC022034.3-201ENST00000471393 478 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 RPL7P47-201ENST00000497299 556 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.59□□□□□ -1.83
SHMT2P34897 RNU6-1231P-201ENST00000517185 103 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.59□□□□□ -1.83
SHMT2P34897 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.59□□□□□ -1.83
SHMT2P34897 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.59□□□□□ -1.83
SHMT2P34897 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.59□□□□□ -1.83
SHMT2P34897 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.59□□□□□ -1.83
SHMT2P34897 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.59□□□□□ -1.83
SHMT2P34897 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.59□□□□□ -1.83
SHMT2P34897 NF1P5-201ENST00000588287 448 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHMT2P34897 AL445493.3-201ENST00000619568 477 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.59□□□□□ -1.83
SHMT2P34897 U6.107-201ENST00000637108 79 ntBASIC3.59□□□□□ -1.83
SHMT2P34897 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHMT2P34897 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHMT2P34897 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHMT2P34897 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SHMT2P34897 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SHMT2P34897 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SHMT2P34897 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
SHMT2P34897 ASNSP1-204ENST00000641977 1664 ntBASIC3.59□□□□□ -1.84
SHMT2P34897 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHMT2P34897 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
SHMT2P34897 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHMT2P34897 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHMT2P34897 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.58□□□□□ -1.84
SHMT2P34897 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHMT2P34897 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHMT2P34897 RNU6-283P-201ENST00000364788 107 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 RNU6-650P-201ENST00000365658 111 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms