Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CU459211.1-201ENST00000635667 749 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC13P31276 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HOXC13P31276 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC13P31276 ELL2P4-201ENST00000446870 1376 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC13P31276 AC116096.1-201ENST00000566804 2314 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC13P31276 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC13P31276 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC13P31276 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC13P31276 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC13P31276 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC13P31276 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HOXC13P31276 RNA5SP124-201ENST00000362739 110 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC13P31276 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.39□□□□□ -1.71
HOXC13P31276 MIR607-201ENST00000385241 96 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 AL355615.1-201ENST00000406187 641 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 RN7SKP33-201ENST00000410942 340 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC13P31276 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC13P31276 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC13P31276 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC13P31276 COX6B1P7-201ENST00000430845 235 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 MRPL50P1-201ENST00000431951 384 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 HMGB1P45-201ENST00000435986 653 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 MTATP6P26-201ENST00000445926 662 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 VN1R34P-201ENST00000447387 883 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC13P31276 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 RPL5P24-201ENST00000463742 885 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 AC015724.1-201ENST00000478577 156 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 AC015908.1-201ENST00000478739 476 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 AC106872.2-201ENST00000494303 480 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 AC098862.1-201ENST00000504991 413 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 TPT1P8-201ENST00000510120 555 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 FTH1P21-201ENST00000512179 511 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 NPM1P41-201ENST00000512920 831 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC13P31276 IGLV3-26-201ENST00000520756 302 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.39□□□□□ -1.71
HOXC13P31276 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC13P31276 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC13P31276 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC13P31276 BNIP3P27-201ENST00000599991 412 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC13P31276 AL157392.4-201ENST00000609756 345 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC13P31276 AL590396.4-201ENST00000636779 956 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC13P31276 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
HOXC13P31276 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC13P31276 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC13P31276 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC13P31276 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HOXC13P31276 AC025263.3-201ENST00000622965 1396 ntBASIC4.39□□□□□ -1.71
HOXC13P31276 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC13P31276 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC13P31276 AC087190.4-201ENST00000574616 8334 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC13P31276 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXC13P31276 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC13P31276 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC13P31276 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC13P31276 RNU6-207P-201ENST00000384137 107 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 RNU6-925P-201ENST00000384629 104 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 RPL22P22-201ENST00000395439 379 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 MIR1179-201ENST00000408703 91 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 RNA5SP146-201ENST00000410743 123 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC13P31276 RAC1P3-201ENST00000416129 580 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC13P31276 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC13P31276 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC13P31276 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC13P31276 FO393414.1-201ENST00000428697 1184 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC13P31276 BTF3P10-201ENST00000433415 495 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 CYCSP43-201ENST00000438233 310 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC13P31276 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC13P31276 OR51B8P-201ENST00000449892 769 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC13P31276 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC13P31276 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC13P31276 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC13P31276 RPS26P28-201ENST00000470806 348 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 AC087879.1-201ENST00000474343 374 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC13P31276 AC068587.2-201ENST00000478386 781 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC13P31276 MTCO3P27-201ENST00000514397 196 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 HIGD1AP3-201ENST00000515857 278 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 SNORA70.14-201ENST00000516205 110 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms