Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU2-21P-201ENST00000410368 188 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXC12P31275 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXC12P31275 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXC12P31275 AL355433.1-201ENST00000422804 300 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AC007283.2-201ENST00000424739 197 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 RPS26P47-201ENST00000427219 348 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXC12P31275 AC126120.1-201ENST00000431082 470 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AL445928.1-201ENST00000435545 222 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AL049734.2-201ENST00000441066 616 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 RPS7P3-201ENST00000443360 580 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXC12P31275 PMCHL2-203ENST00000457791 237 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AC022364.2-201ENST00000457963 554 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXC12P31275 MTCO1P35-201ENST00000515270 228 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXC12P31275 AP006245.2-201ENST00000522004 300 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC12P31275 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXC12P31275 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXC12P31275 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC12P31275 GLYCAM1-201ENST00000546596 285 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AC068993.1-201ENST00000546724 589 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AC123904.3-201ENST00000547218 814 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AC034105.3-201ENST00000565294 442 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXC12P31275 AC010547.6-201ENST00000571789 193 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC12P31275 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC12P31275 AC119403.2-201ENST00000590960 598 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AC008782.1-201ENST00000603386 430 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 Z84480.1-201ENST00000605131 311 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AC008966.2-201ENST00000606157 453 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AC019193.2-201ENST00000610012 634 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXC12P31275 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC12P31275 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC12P31275 AC099654.10-201ENST00000640395 161 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC12P31275 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HOXC12P31275 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC12P31275 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXC12P31275 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC12P31275 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC12P31275 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXC12P31275 AL031119.1-201ENST00000404707 1879 ntBASIC5.22□□□□□ -1.57
HOXC12P31275 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC12P31275 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC12P31275 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXC12P31275 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXC12P31275 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXC12P31275 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HOXC12P31275 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXC12P31275 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.21□□□□□ -1.57
HOXC12P31275 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.21□□□□□ -1.57
HOXC12P31275 ASNSP1-201ENST00000518311 1939 ntBASIC5.21□□□□□ -1.57
HOXC12P31275 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.57
HOXC12P31275 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC12P31275 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC12P31275 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC12P31275 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC12P31275 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC12P31275 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HOXC12P31275 RNU6-97P-201ENST00000363387 104 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 RNU4-1-201ENST00000363925 141 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 RN7SKP128-201ENST00000364270 303 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 RNY4P16-201ENST00000364768 94 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 RNA5SP223-201ENST00000365174 120 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 RNU1-39P-201ENST00000383897 165 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 RNU6-908P-201ENST00000410160 94 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 RN7SKP235-201ENST00000410662 305 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXC12P31275 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC12P31275 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC12P31275 RPS15AP12-201ENST00000419498 388 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 AC093155.2-201ENST00000420734 937 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC12P31275 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXC12P31275 SUMO2P3-201ENST00000438311 288 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 AC114495.1-201ENST00000441274 436 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC12P31275 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXC12P31275 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC12P31275 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC12P31275 SNRPGP6-201ENST00000451124 220 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 AL035090.1-201ENST00000454835 332 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 UBDP1-202ENST00000457888 382 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC12P31275 PFN1P6-201ENST00000476786 399 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 RPL23AP72-201ENST00000492447 435 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 RN7SL57P-201ENST00000493687 290 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 OR5H5P-201ENST00000503164 928 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 MTND3P22-201ENST00000510932 243 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC12P31275 AC093853.1-201ENST00000515689 483 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 RNA5SP34-201ENST00000516887 130 ntBASIC5.21□□□□□ -1.58
HOXC12P31275 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC12P31275 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms