Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNGA1P29973 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.53□□□□□ -1.52
CNGA1P29973 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNGA1P29973 RNU6-433P-201ENST00000363216 104 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 Y_RNA.126-201ENST00000363382 111 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 RNA5SP447-201ENST00000363749 119 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 RNU6-374P-201ENST00000364146 108 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 Y_RNA.318-201ENST00000365131 97 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 RNA5SP88-201ENST00000365560 109 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNGA1P29973 ARF4P3-201ENST00000397387 509 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 RPS3AP26-201ENST00000398259 784 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 SSXP10-201ENST00000402595 565 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 RPL21P67-201ENST00000402896 478 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 HMGB1P17-201ENST00000403495 628 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 AL049697.2-201ENST00000403708 294 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNGA1P29973 HSFY4P-201ENST00000415994 1181 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 NPM1P11-201ENST00000417106 855 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.53□□□□□ -1.52
CNGA1P29973 AC093698.1-201ENST00000423843 571 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.53□□□□□ -1.52
CNGA1P29973 NPM1P34-201ENST00000428821 893 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 UBE2FP3-201ENST00000436366 524 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 RPS29P9-201ENST00000440360 171 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.53□□□□□ -1.52
CNGA1P29973 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.53□□□□□ -1.52
CNGA1P29973 ARPC3P2-201ENST00000457786 533 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.53□□□□□ -1.52
CNGA1P29973 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.53□□□□□ -1.52
CNGA1P29973 AC080014.1-201ENST00000496877 1201 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.53□□□□□ -1.52
CNGA1P29973 AC026412.2-201ENST00000512270 1075 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 MTCYBP43-201ENST00000513621 740 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 RNA5SP216-201ENST00000516111 123 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.53□□□□□ -1.52
CNGA1P29973 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.53□□□□□ -1.52
CNGA1P29973 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.53□□□□□ -1.52
CNGA1P29973 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.53□□□□□ -1.52
CNGA1P29973 HSPE1P3-201ENST00000559254 309 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 NDUFB4P11-201ENST00000560510 395 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.53□□□□□ -1.52
CNGA1P29973 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.53□□□□□ -1.52
CNGA1P29973 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.53□□□□□ -1.52
CNGA1P29973 AC136618.2-201ENST00000575091 400 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.53□□□□□ -1.52
CNGA1P29973 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.53□□□□□ -1.52
CNGA1P29973 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.53□□□□□ -1.52
CNGA1P29973 AL356218.2-201ENST00000605264 187 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.53□□□□□ -1.52
CNGA1P29973 AC007497.1-201ENST00000610421 561 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 MIR7844-201ENST00000616161 122 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 AC008443.7-201ENST00000622195 246 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNGA1P29973 AC083843.3-201ENST00000623679 2186 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNGA1P29973 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.53□□□□□ -1.52
CNGA1P29973 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNGA1P29973 AC130650.2-201ENST00000618736 2403 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CNGA1P29973 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
CNGA1P29973 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.52□□□□□ -1.53
CNGA1P29973 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CNGA1P29973 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.52□□□□□ -1.53
CNGA1P29973 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CNGA1P29973 AL592148.3-201ENST00000608771 2646 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNGA1P29973 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.52□□□□□ -1.53
CNGA1P29973 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.52□□□□□ -1.53
CNGA1P29973 SOCS5P3-201ENST00000425115 1576 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 OR10J6P-201ENST00000289731 930 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 SNORA70F-201ENST00000384142 135 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CNGA1P29973 OR8G2P-201ENST00000412796 908 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 AC114755.2-201ENST00000413520 361 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 TBCAP2-201ENST00000416175 326 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 RPS15AP40-201ENST00000419621 391 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.52□□□□□ -1.53
CNGA1P29973 AC004975.1-201ENST00000428733 208 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 ZYG11AP1-201ENST00000430329 837 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.52□□□□□ -1.53
CNGA1P29973 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.52□□□□□ -1.53
CNGA1P29973 AC026410.2-201ENST00000460281 156 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 AC109486.1-201ENST00000486833 374 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 RNF138P1-201ENST00000502765 546 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.52□□□□□ -1.53
CNGA1P29973 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.52□□□□□ -1.53
CNGA1P29973 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.52□□□□□ -1.53
CNGA1P29973 AC104986.1-201ENST00000517978 436 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 NDUFA5P2-201ENST00000519723 344 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 AC087276.1-201ENST00000529659 480 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.52□□□□□ -1.53
CNGA1P29973 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.52□□□□□ -1.53
CNGA1P29973 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.52□□□□□ -1.53
CNGA1P29973 AC068446.3-201ENST00000555285 382 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 ACTR3BP3-201ENST00000565577 979 ntBASIC5.52□□□□□ -1.53
CNGA1P29973 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.52□□□□□ -1.53
CNGA1P29973 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.52□□□□□ -1.53
CNGA1P29973 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms