Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC138649.5-201ENST00000637456 137 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN4P29074 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
PTPN4P29074 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN4P29074 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN4P29074 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.94□□□□□ -1.78
PTPN4P29074 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPN4P29074 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPN4P29074 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTPN4P29074 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPN4P29074 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PTPN4P29074 RNU11-4P-201ENST00000391149 133 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 EIF5P1-201ENST00000400019 1231 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.94□□□□□ -1.78
PTPN4P29074 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 RPL7P53-201ENST00000421245 739 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 BMS1P19-201ENST00000433925 393 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AL512661.1-201ENST00000434586 1253 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AL356276.2-201ENST00000435919 558 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 SKP1P1-201ENST00000438081 489 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 DNAJC19P1-201ENST00000455312 319 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.94□□□□□ -1.78
PTPN4P29074 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.94□□□□□ -1.78
PTPN4P29074 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.94□□□□□ -1.78
PTPN4P29074 AC091153.1-201ENST00000466297 402 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AF213884.1-201ENST00000488102 463 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 RPL5P23-201ENST00000496040 868 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.94□□□□□ -1.78
PTPN4P29074 AC010460.1-201ENST00000507087 466 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.94□□□□□ -1.78
PTPN4P29074 AC008494.2-201ENST00000514544 370 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AC023632.4-201ENST00000517783 191 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPN4P29074 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.94□□□□□ -1.78
PTPN4P29074 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.94□□□□□ -1.78
PTPN4P29074 AP000916.1-201ENST00000533869 835 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AC092747.2-201ENST00000545069 983 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.94□□□□□ -1.78
PTPN4P29074 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPN4P29074 MIR4644-201ENST00000579929 84 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 VN1R88P-201ENST00000596787 292 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AC098483.2-201ENST00000603158 454 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AC245389.1-201ENST00000605141 529 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AC120053.1-201ENST00000607706 736 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 AC018926.3-201ENST00000618841 406 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
PTPN4P29074 AP002371.2-201ENST00000624450 503 ntBASIC3.94□□□□□ -1.78
PTPN4P29074 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPN4P29074 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTPN4P29074 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPN4P29074 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPN4P29074 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN4P29074 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN4P29074 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN4P29074 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN4P29074 AC073055.1-201ENST00000456901 1621 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN4P29074 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN4P29074 RNU6-1005P-201ENST00000384519 107 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 MIR554-201ENST00000384874 96 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PTPN4P29074 MIR1183-201ENST00000408856 89 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN4P29074 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN4P29074 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN4P29074 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.93□□□□□ -1.78
PTPN4P29074 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN4P29074 RPL21P109-201ENST00000422213 475 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 OR8F1P-201ENST00000425243 930 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN4P29074 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN4P29074 RPL32P14-201ENST00000463196 378 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 VN1R105P-201ENST00000486595 910 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN4P29074 RPL7P24-201ENST00000493052 752 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN4P29074 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN4P29074 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN4P29074 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN4P29074 RN7SKP277-201ENST00000516895 283 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN4P29074 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPN4P29074 RFPL1S-203ENST00000539579 330 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 CBX3P5-201ENST00000552017 521 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 AC011611.5-201ENST00000552477 578 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPN4P29074 AL442163.2-201ENST00000553912 710 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.93□□□□□ -1.78
PTPN4P29074 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN4P29074 AC012254.4-201ENST00000588843 273 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN4P29074 MIR92B-201ENST00000607575 96 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 AC021851.1-201ENST00000608537 1082 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 VN1R9P-201ENST00000614184 867 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN4P29074 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PTPN4P29074 AL356863.1-201ENST00000623378 1080 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 AL590396.2-201ENST00000636511 1041 ntBASIC3.93□□□□□ -1.78
PTPN4P29074 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN4P29074 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms