Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COL8A2P25067 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL8A2P25067 PHKBP1-201ENST00000450951 1951 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL8A2P25067 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.92□□□□□ -1.94
COL8A2P25067 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL8A2P25067 RNU6-618P-201ENST00000363518 112 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 RNU1-33P-201ENST00000364249 162 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
COL8A2P25067 RNU6-532P-201ENST00000384318 107 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.92□□□□□ -1.94
COL8A2P25067 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.92□□□□□ -1.94
COL8A2P25067 AC127526.1-201ENST00000417526 366 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 AL158156.1-201ENST00000422509 473 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 MTCO3P21-201ENST00000430791 643 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 TRIM60P13-201ENST00000432350 1283 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 AC114878.1-201ENST00000441166 358 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.92□□□□□ -1.94
COL8A2P25067 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.92□□□□□ -1.94
COL8A2P25067 MTCO3P16-201ENST00000454456 754 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 BX510359.1-201ENST00000456973 237 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 RPL32P34-201ENST00000486380 400 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 RPS3AP50-201ENST00000487064 803 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 RPL7P47-201ENST00000497299 556 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
COL8A2P25067 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 NDUFB4P9-201ENST00000511646 388 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 RNA5SP309-201ENST00000516670 106 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 AC067904.2-201ENST00000517322 1283 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 IGKV2-23-201ENST00000518729 323 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.92□□□□□ -1.94
COL8A2P25067 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.92□□□□□ -1.94
COL8A2P25067 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.92□□□□□ -1.94
COL8A2P25067 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.92□□□□□ -1.94
COL8A2P25067 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.92□□□□□ -1.94
COL8A2P25067 AL031985.2-201ENST00000600955 480 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 Z82195.1-201ENST00000604558 398 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.92□□□□□ -1.94
COL8A2P25067 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A2P25067 AC008121.2-201ENST00000614647 523 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 MIR8058-201ENST00000615737 89 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.92□□□□□ -1.94
COL8A2P25067 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.92□□□□□ -1.94
COL8A2P25067 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.92□□□□□ -1.94
COL8A2P25067 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.92□□□□□ -1.94
COL8A2P25067 AL445437.1-201ENST00000623157 3087 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL8A2P25067 AC073346.2-201ENST00000624724 2058 ntBASIC2.92□□□□□ -1.94
COL8A2P25067 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL8A2P25067 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
COL8A2P25067 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.91□□□□□ -1.94
COL8A2P25067 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.91□□□□□ -1.94
COL8A2P25067 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL8A2P25067 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
COL8A2P25067 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.91□□□□□ -1.94
COL8A2P25067 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL8A2P25067 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
COL8A2P25067 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL8A2P25067 RNA5SP235-201ENST00000365411 114 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.91□□□□□ -1.94
COL8A2P25067 MIR320B1-201ENST00000390209 79 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 KRR1P1-201ENST00000419430 803 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 AC006989.1-201ENST00000427212 131 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 RSL24D1P8-201ENST00000434442 492 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.91□□□□□ -1.94
COL8A2P25067 USP9YP7-201ENST00000436723 430 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 USP9YP32-201ENST00000452432 430 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.91□□□□□ -1.94
COL8A2P25067 NPM1P17-201ENST00000479221 602 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 OR52A4P-202ENST00000481634 799 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 AC005912.1-201ENST00000495392 255 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 FCF1P3-201ENST00000496394 590 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.91□□□□□ -1.94
COL8A2P25067 AC010627.1-201ENST00000503819 1294 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.91□□□□□ -1.94
COL8A2P25067 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.91□□□□□ -1.94
COL8A2P25067 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.91□□□□□ -1.94
COL8A2P25067 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.91□□□□□ -1.94
COL8A2P25067 AC008489.1-201ENST00000524271 483 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.91□□□□□ -1.94
COL8A2P25067 CYP2C60P-201ENST00000566088 139 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.91□□□□□ -1.94
COL8A2P25067 AC022884.3-201ENST00000579571 248 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC2.91□□□□□ -1.94
COL8A2P25067 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.91□□□□□ -1.94
COL8A2P25067 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.91□□□□□ -1.94
COL8A2P25067 uc_338.9-201ENST00000617424 182 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms