Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.21□□□□□ -1.58
ATF4P18848 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.21□□□□□ -1.58
ATF4P18848 TUBBP11-201ENST00000472255 252 ntBASIC5.21□□□□□ -1.58
ATF4P18848 AP000852.1-201ENST00000472460 573 ntBASIC5.21□□□□□ -1.58
ATF4P18848 RPS26P6-201ENST00000475156 348 ntBASIC5.21□□□□□ -1.58
ATF4P18848 RPL5P22-201ENST00000480199 884 ntBASIC5.21□□□□□ -1.58
ATF4P18848 AC233702.1-201ENST00000482905 502 ntBASIC5.21□□□□□ -1.58
ATF4P18848 RN7SL187P-201ENST00000495587 303 ntBASIC5.21□□□□□ -1.58
ATF4P18848 NACAP5-201ENST00000509863 636 ntBASIC5.21□□□□□ -1.58
ATF4P18848 AC114781.3-201ENST00000512083 142 ntBASIC5.21□□□□□ -1.58
ATF4P18848 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.21□□□□□ -1.58
ATF4P18848 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.21□□□□□ -1.58
ATF4P18848 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.21□□□□□ -1.58
ATF4P18848 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ATF4P18848 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ATF4P18848 ARL2BPP2-201ENST00000550907 489 ntBASIC5.21□□□□□ -1.58
ATF4P18848 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.21□□□□□ -1.58
ATF4P18848 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.21□□□□□ -1.58
ATF4P18848 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.21□□□□□ -1.58
ATF4P18848 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.21□□□□□ -1.58
ATF4P18848 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.21□□□□□ -1.58
ATF4P18848 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
ATF4P18848 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.21□□□□□ -1.58
ATF4P18848 AC004908.1-201ENST00000606572 541 ntBASIC5.21□□□□□ -1.58
ATF4P18848 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.21□□□□□ -1.58
ATF4P18848 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATF4P18848 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.21□□□□□ -1.58
ATF4P18848 AC140479.4-205ENST00000636339 820 ntBASIC5.21□□□□□ -1.58
ATF4P18848 AL356585.10-201ENST00000641883 123 ntBASIC5.21□□□□□ -1.58
ATF4P18848 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ATF4P18848 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.21□□□□□ -1.58
ATF4P18848 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
ATF4P18848 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.21□□□□□ -1.58
ATF4P18848 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
ATF4P18848 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ATF4P18848 AC004817.4-201ENST00000602396 3625 ntBASIC5.21□□□□□ -1.58
ATF4P18848 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.21□□□□□ -1.58
ATF4P18848 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATF4P18848 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
ATF4P18848 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATF4P18848 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ATF4P18848 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATF4P18848 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.2□□□□□ -1.58
ATF4P18848 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.2□□□□□ -1.58
ATF4P18848 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATF4P18848 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ATF4P18848 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATF4P18848 Y_RNA.157-201ENST00000363638 102 ntBASIC5.2□□□□□ -1.58
ATF4P18848 RNU5E-6P-201ENST00000365574 115 ntBASIC5.2□□□□□ -1.58
ATF4P18848 SNORD37.1-201ENST00000390968 65 ntBASIC5.2□□□□□ -1.58
ATF4P18848 AL354719.1-201ENST00000406535 843 ntBASIC5.2□□□□□ -1.58
ATF4P18848 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.2□□□□□ -1.58
ATF4P18848 RNU2-43P-201ENST00000410306 190 ntBASIC5.2□□□□□ -1.58
ATF4P18848 RNU2-36P-201ENST00000410361 191 ntBASIC5.2□□□□□ -1.58
ATF4P18848 RNU6-1068P-201ENST00000410958 103 ntBASIC5.2□□□□□ -1.58
ATF4P18848 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATF4P18848 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.2□□□□□ -1.58
ATF4P18848 AC007365.2-201ENST00000428806 458 ntBASIC5.2□□□□□ -1.58
ATF4P18848 RPL36AP6-201ENST00000435770 321 ntBASIC5.2□□□□□ -1.58
ATF4P18848 RPS10P14-201ENST00000440748 502 ntBASIC5.2□□□□□ -1.58
ATF4P18848 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.2□□□□□ -1.58
ATF4P18848 RBMY2EP-202ENST00000456360 940 ntBASIC5.2□□□□□ -1.58
ATF4P18848 MED28P7-201ENST00000456611 530 ntBASIC5.2□□□□□ -1.58
ATF4P18848 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.2□□□□□ -1.58
ATF4P18848 AC008481.1-201ENST00000463278 396 ntBASIC5.2□□□□□ -1.58
ATF4P18848 GMFBP1-201ENST00000467831 427 ntBASIC5.2□□□□□ -1.58
ATF4P18848 RN7SL216P-201ENST00000471607 298 ntBASIC5.2□□□□□ -1.58
ATF4P18848 AC008629.2-201ENST00000503783 483 ntBASIC5.2□□□□□ -1.58
ATF4P18848 IGLC4-201ENST00000517690 248 ntBASIC5.2□□□□□ -1.58
ATF4P18848 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.2□□□□□ -1.58
ATF4P18848 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
ATF4P18848 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.2□□□□□ -1.58
ATF4P18848 AP001803.1-201ENST00000525668 147 ntBASIC5.2□□□□□ -1.58
ATF4P18848 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.2□□□□□ -1.58
ATF4P18848 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.2□□□□□ -1.58
ATF4P18848 AC004232.1-201ENST00000571388 208 ntBASIC5.2□□□□□ -1.58
ATF4P18848 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.2□□□□□ -1.58
ATF4P18848 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.2□□□□□ -1.58
ATF4P18848 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.2□□□□□ -1.58
ATF4P18848 MIR4293-201ENST00000584305 78 ntBASIC5.2□□□□□ -1.58
ATF4P18848 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.2□□□□□ -1.58
ATF4P18848 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.2□□□□□ -1.58
ATF4P18848 AC011447.2-201ENST00000592921 283 ntBASIC5.2□□□□□ -1.58
ATF4P18848 AC020914.7-201ENST00000594477 545 ntBASIC5.2□□□□□ -1.58
ATF4P18848 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.2□□□□□ -1.58
ATF4P18848 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.2□□□□□ -1.58
ATF4P18848 AC131238.1-201ENST00000617135 328 ntBASIC5.2□□□□□ -1.58
ATF4P18848 AC005899.6-201ENST00000620729 297 ntBASIC5.2□□□□□ -1.58
ATF4P18848 AC006504.8-201ENST00000621046 635 ntBASIC5.2□□□□□ -1.58
ATF4P18848 AC079684.1-201ENST00000621405 437 ntBASIC5.2□□□□□ -1.58
ATF4P18848 AC087894.3-201ENST00000623682 349 ntBASIC5.2□□□□□ -1.58
ATF4P18848 U6.114-201ENST00000636407 96 ntBASIC5.2□□□□□ -1.58
ATF4P18848 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATF4P18848 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.2□□□□□ -1.58
ATF4P18848 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.2□□□□□ -1.58
ATF4P18848 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATF4P18848 AC025031.4-201ENST00000621248 3271 ntBASIC5.2□□□□□ -1.58
ATF4P18848 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATF4P18848 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATF4P18848 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms