Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
ATF3P18847 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.66□□□□□ -1.5
ATF3P18847 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
ATF3P18847 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.65□□□□□ -1.5
ATF3P18847 AP004289.2-201ENST00000444413 1457 ntBASIC5.65□□□□□ -1.5
ATF3P18847 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATF3P18847 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ATF3P18847 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
ATF3P18847 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ATF3P18847 RNVU1-14-201ENST00000384770 164 ntBASIC5.65□□□□□ -1.5
ATF3P18847 MIR513B-201ENST00000385136 84 ntBASIC5.65□□□□□ -1.5
ATF3P18847 SNORD66.1-201ENST00000391230 76 ntBASIC5.65□□□□□ -1.5
ATF3P18847 AL450992.3-201ENST00000413192 568 ntBASIC5.65□□□□□ -1.5
ATF3P18847 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.65□□□□□ -1.5
ATF3P18847 MOB1AP1-201ENST00000430903 535 ntBASIC5.65□□□□□ -1.5
ATF3P18847 CYCSP32-201ENST00000440548 321 ntBASIC5.65□□□□□ -1.5
ATF3P18847 ELOCP13-201ENST00000443934 329 ntBASIC5.65□□□□□ -1.5
ATF3P18847 RPL7P59-201ENST00000447700 943 ntBASIC5.65□□□□□ -1.5
ATF3P18847 PPIAP3-201ENST00000450588 505 ntBASIC5.65□□□□□ -1.5
ATF3P18847 AC079776.3-201ENST00000450665 370 ntBASIC5.65□□□□□ -1.5
ATF3P18847 RPS11P1-201ENST00000451072 473 ntBASIC5.65□□□□□ -1.5
ATF3P18847 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.65□□□□□ -1.5
ATF3P18847 AL358832.1-201ENST00000497800 389 ntBASIC5.65□□□□□ -1.5
ATF3P18847 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.65□□□□□ -1.5
ATF3P18847 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.65□□□□□ -1.5
ATF3P18847 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.65□□□□□ -1.5
ATF3P18847 MTND4P33-201ENST00000556706 766 ntBASIC5.65□□□□□ -1.5
ATF3P18847 AC023813.2-201ENST00000564321 469 ntBASIC5.65□□□□□ -1.5
ATF3P18847 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.65□□□□□ -1.5
ATF3P18847 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.65□□□□□ -1.5
ATF3P18847 MTND3P19-201ENST00000603825 345 ntBASIC5.65□□□□□ -1.5
ATF3P18847 ELOCP35-201ENST00000604289 336 ntBASIC5.65□□□□□ -1.5
ATF3P18847 AC005000.2-201ENST00000605468 310 ntBASIC5.65□□□□□ -1.5
ATF3P18847 AC024257.5-201ENST00000612739 531 ntBASIC5.65□□□□□ -1.5
ATF3P18847 AL158163.2-201ENST00000619110 700 ntBASIC5.65□□□□□ -1.5
ATF3P18847 MIR7975-201ENST00000619350 68 ntBASIC5.65□□□□□ -1.5
ATF3P18847 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.65□□□□□ -1.5
ATF3P18847 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.65□□□□□ -1.5
ATF3P18847 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ATF3P18847 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ATF3P18847 Z82217.1-201ENST00000625157 8149 ntBASIC5.65□□□□□ -1.51
ATF3P18847 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
ATF3P18847 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF3P18847 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF3P18847 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF3P18847 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATF3P18847 AC016716.1-201ENST00000265882 708 ntBASIC5.64□□□□□ -1.51
ATF3P18847 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF3P18847 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF3P18847 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.64□□□□□ -1.51
ATF3P18847 TMX2P1-201ENST00000436507 708 ntBASIC5.64□□□□□ -1.51
ATF3P18847 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF3P18847 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.64□□□□□ -1.51
ATF3P18847 AC007327.1-201ENST00000447461 264 ntBASIC5.64□□□□□ -1.51
ATF3P18847 AC011037.1-201ENST00000483964 558 ntBASIC5.64□□□□□ -1.51
ATF3P18847 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF3P18847 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF3P18847 AC109471.1-201ENST00000511631 612 ntBASIC5.64□□□□□ -1.51
ATF3P18847 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.64□□□□□ -1.51
ATF3P18847 RNU6-202P-201ENST00000515998 96 ntBASIC5.64□□□□□ -1.51
ATF3P18847 SNORD116-26-201ENST00000516006 96 ntBASIC5.64□□□□□ -1.51
ATF3P18847 RN7SKP287-201ENST00000516546 266 ntBASIC5.64□□□□□ -1.51
ATF3P18847 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
ATF3P18847 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.64□□□□□ -1.51
ATF3P18847 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF3P18847 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF3P18847 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF3P18847 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF3P18847 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF3P18847 MIR4512-201ENST00000583257 77 ntBASIC5.64□□□□□ -1.51
ATF3P18847 AP001269.3-201ENST00000588718 329 ntBASIC5.64□□□□□ -1.51
ATF3P18847 AC093424.1-201ENST00000604999 338 ntBASIC5.64□□□□□ -1.51
ATF3P18847 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF3P18847 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATF3P18847 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ATF3P18847 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.64□□□□□ -1.51
ATF3P18847 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF3P18847 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ATF3P18847 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF3P18847 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATF3P18847 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF3P18847 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ATF3P18847 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF3P18847 NACA3P-201ENST00000359690 648 ntBASIC5.63□□□□□ -1.51
ATF3P18847 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATF3P18847 MIR217-201ENST00000384817 110 ntBASIC5.63□□□□□ -1.51
ATF3P18847 ERHP2-201ENST00000402323 299 ntBASIC5.63□□□□□ -1.51
ATF3P18847 AL139098.1-201ENST00000407291 389 ntBASIC5.63□□□□□ -1.51
ATF3P18847 SNORA3.3-201ENST00000408712 125 ntBASIC5.63□□□□□ -1.51
ATF3P18847 CTSL3P-202ENST00000412179 788 ntBASIC5.63□□□□□ -1.51
ATF3P18847 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.63□□□□□ -1.51
ATF3P18847 RPL22P18-201ENST00000417197 377 ntBASIC5.63□□□□□ -1.51
ATF3P18847 HMGB1P49-201ENST00000418882 569 ntBASIC5.63□□□□□ -1.51
ATF3P18847 AC007435.1-201ENST00000421086 415 ntBASIC5.63□□□□□ -1.51
ATF3P18847 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF3P18847 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATF3P18847 Z99714.1-201ENST00000450463 807 ntBASIC5.63□□□□□ -1.51
ATF3P18847 RPS15AP1-201ENST00000457423 391 ntBASIC5.63□□□□□ -1.51
ATF3P18847 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.63□□□□□ -1.51
ATF3P18847 AC084024.2-201ENST00000503480 791 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms