Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
PDGFRAP16234 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFRAP16234 RNA5SP283-201ENST00000365604 119 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 MCTS2P-201ENST00000394552 546 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 AL603865.2-201ENST00000401679 213 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 BTBD10P2-201ENST00000404779 676 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 MIR1251-201ENST00000408552 70 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 RNU6-628P-201ENST00000410675 107 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 RNA5SP306-201ENST00000411087 107 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 AC008280.1-201ENST00000418851 412 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 SFR1P2-201ENST00000421841 730 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 AC092634.2-201ENST00000428146 1010 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.21□□□□□ -1.74
PDGFRAP16234 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.21□□□□□ -1.74
PDGFRAP16234 RPS26P56-201ENST00000444468 240 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.21□□□□□ -1.74
PDGFRAP16234 AL162151.2-201ENST00000448875 158 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 FABP3P2-201ENST00000453169 399 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 AL672167.3-201ENST00000465951 960 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 FTH1P2-201ENST00000466086 412 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 RPL21P103-201ENST00000479921 488 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 AC106872.2-201ENST00000494303 480 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.21□□□□□ -1.74
PDGFRAP16234 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.21□□□□□ -1.74
PDGFRAP16234 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.21□□□□□ -1.74
PDGFRAP16234 AC026402.1-201ENST00000513642 170 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 RN7SKP277-201ENST00000516895 283 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 OR8I1P-201ENST00000529291 931 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.21□□□□□ -1.74
PDGFRAP16234 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.21□□□□□ -1.74
PDGFRAP16234 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.21□□□□□ -1.74
PDGFRAP16234 GNRHR2P1-201ENST00000555315 631 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.21□□□□□ -1.74
PDGFRAP16234 ZNF971P-201ENST00000562068 1249 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.21□□□□□ -1.74
PDGFRAP16234 OR1AB1P-201ENST00000585564 761 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 VN1R85P-201ENST00000601587 426 ntBASIC4.21□□□□□ -1.74
PDGFRAP16234 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.21□□□□□ -1.74
PDGFRAP16234 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFRAP16234 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.21□□□□□ -1.74
PDGFRAP16234 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFRAP16234 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFRAP16234 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFRAP16234 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFRAP16234 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFRAP16234 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.2□□□□□ -1.74
PDGFRAP16234 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PDGFRAP16234 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 RNA5SP167-201ENST00000365461 116 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFRAP16234 SFR1P1-201ENST00000403720 688 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 AC004552.1-201ENST00000419089 348 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 AC027644.1-201ENST00000419595 298 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFRAP16234 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFRAP16234 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFRAP16234 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFRAP16234 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFRAP16234 SDR42E1P3-201ENST00000438345 502 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 TPTE2P3-201ENST00000441562 1189 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.2□□□□□ -1.74
PDGFRAP16234 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFRAP16234 RPS26P3-201ENST00000470205 348 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 AC090543.2-201ENST00000483963 348 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 AC004057.1-201ENST00000485827 348 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 RPL31P61-201ENST00000496160 376 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFRAP16234 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFRAP16234 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFRAP16234 IGLVIV-53-201ENST00000520107 367 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.2□□□□□ -1.74
PDGFRAP16234 AC104417.1-201ENST00000523974 751 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFRAP16234 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFRAP16234 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.2□□□□□ -1.74
PDGFRAP16234 OR8R1P-201ENST00000543943 764 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.2□□□□□ -1.74
PDGFRAP16234 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFRAP16234 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFRAP16234 MIR4666A-201ENST00000580160 79 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 AC022069.1-201ENST00000582910 658 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.2□□□□□ -1.74
PDGFRAP16234 AC008638.3-201ENST00000603341 463 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 AC018754.1-201ENST00000607486 925 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.2□□□□□ -1.74
PDGFRAP16234 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFRAP16234 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFRAP16234 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFRAP16234 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFRAP16234 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFRAP16234 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PDGFRAP16234 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
PDGFRAP16234 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFRAP16234 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFRAP16234 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFRAP16234 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFRAP16234 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.19□□□□□ -1.74
PDGFRAP16234 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFRAP16234 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms