| MUC1 | P15941 | CD200R1-205 | ENST00000490004 | 778 nt | TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC008957.1-201 | ENST00000510740 | 478 nt | TSL 3 BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | WWC2-AS1-201 | ENST00000511846 | 404 nt | TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | LINC02480-201 | ENST00000511875 | 612 nt | TSL 2 BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | Vault.1-201 | ENST00000516474 | 102 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC103833.1-201 | ENST00000517442 | 172 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC008489.1-201 | ENST00000524271 | 483 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC004923.2-201 | ENST00000529649 | 369 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | NAV2-AS3-201 | ENST00000534036 | 598 nt | TSL 3 BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC011602.1-201 | ENST00000546484 | 331 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC106785.3-201 | ENST00000564064 | 847 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AL022097.1-201 | ENST00000602500 | 806 nt | TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | ABI1P1-201 | ENST00000603375 | 1120 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AL671309.1-201 | ENST00000603750 | 544 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RPL21P136-201 | ENST00000605378 | 396 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AL512506.1-201 | ENST00000613918 | 449 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | CC2D2B-209 | ENST00000618242 | 980 nt | TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | PDCD6IPP1-202 | ENST00000622242 | 1064 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | CASC19-284 | ENST00000642142 | 1868 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | ZNF415-207 | ENST00000595193 | 2479 nt | TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| MUC1 | P15941 | CPXCR1-202 | ENST00000373111 | 1577 nt | APPRIS P1 TSL 2 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | TAS2R14-202 | ENST00000537503 | 1858 nt | APPRIS P1 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | POU1F1-202 | ENST00000350375 | 1491 nt | APPRIS P1 TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | CFHR1-201 | ENST00000320493 | 1271 nt | APPRIS P1 TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | NAMPT-202 | ENST00000354289 | 1213 nt | TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | Y_RNA.110-201 | ENST00000363220 | 99 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | CXorf66-201 | ENST00000370540 | 1281 nt | APPRIS P1 TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | MIR124-3-201 | ENST00000384866 | 87 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | SNORA40.4-201 | ENST00000390971 | 128 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC087276.2-201 | ENST00000394183 | 183 nt | TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RN7SKP202-201 | ENST00000410439 | 330 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RNU2-72P-201 | ENST00000411175 | 163 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC062031.1-201 | ENST00000414967 | 747 nt | TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AL138826.1-202 | ENST00000415106 | 692 nt | APPRIS P1 TSL 2 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | EBLN1-201 | ENST00000422359 | 1208 nt | APPRIS P1 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC073508.1-201 | ENST00000428866 | 656 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | CYCSP43-201 | ENST00000438233 | 310 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AL138799.3-201 | ENST00000438968 | 350 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AL513321.1-201 | ENST00000441175 | 761 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AL353613.1-201 | ENST00000443163 | 530 nt | TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC009950.1-206 | ENST00000445199 | 517 nt | TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AL603839.1-201 | ENST00000453437 | 432 nt | TSL 2 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AL589765.1-201 | ENST00000457548 | 386 nt | TSL 2 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RPS27L-205 | ENST00000462430 | 681 nt | TSL 2 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RPS27P29-201 | ENST00000463110 | 252 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC022034.3-201 | ENST00000471393 | 478 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC092924.1-201 | ENST00000496084 | 487 nt | TSL 4 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | HMGN1P11-201 | ENST00000508668 | 303 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC110768.1-201 | ENST00000509222 | 400 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RFESD-208 | ENST00000513950 | 464 nt | TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RNU6-1102P-201 | ENST00000516149 | 96 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | C8orf22-203 | ENST00000517663 | 788 nt | APPRIS ALT1 TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC025434.1-201 | ENST00000520705 | 460 nt | TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | KBTBD3-204 | ENST00000531482 | 874 nt | TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC136475.4-201 | ENST00000534271 | 280 nt | TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AP002892.1-201 | ENST00000537727 | 550 nt | TSL 4 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC091814.1-201 | ENST00000545258 | 719 nt | TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC093014.1-201 | ENST00000548926 | 724 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC009803.1-201 | ENST00000551531 | 416 nt | TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC106785.1-201 | ENST00000565935 | 262 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | MMP2-AS1-202 | ENST00000569037 | 553 nt | TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AP005120.1-202 | ENST00000584321 | 506 nt | TSL 4 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | DARS-AS1-221 | ENST00000608471 | 532 nt | TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AL391497.1-201 | ENST00000608671 | 547 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | GXYLT1P5-202 | ENST00000618830 | 589 nt | TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | SNHG5-221 | ENST00000624295 | 632 nt | TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AP000553.6-201 | ENST00000641242 | 118 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | CHM-205 | ENST00000615443 | 2821 nt | TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | USP33-201 | ENST00000357428 | 4155 nt | TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | ERMN-205 | ENST00000410096 | 3793 nt | APPRIS P1 TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | FAM81B-201 | ENST00000283357 | 1560 nt | APPRIS P2 TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | LUZP2-208 | ENST00000620308 | 4981 nt | TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC073073.2-201 | ENST00000609827 | 2578 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | IL1R1-204 | ENST00000409929 | 1858 nt | TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AGL-206 | ENST00000370165 | 7106 nt | APPRIS P1 TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | DMD-201 | ENST00000288447 | 3856 nt | TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | MTND5P27-201 | ENST00000428871 | 1720 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | P2RY13-201 | ENST00000325602 | 2764 nt | APPRIS P1 TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | DNASE2B-202 | ENST00000370665 | 1269 nt | APPRIS P1 TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | TCEAL7-202 | ENST00000372666 | 852 nt | APPRIS P1 TSL 2 BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RNU6ATAC-201 | ENST00000408749 | 126 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RN7SKP222-201 | ENST00000410651 | 315 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RPS7P13-201 | ENST00000413955 | 498 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC104389.1-201 | ENST00000418080 | 522 nt | TSL 3 BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RPL17P36-201 | ENST00000420302 | 549 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC024619.1-202 | ENST00000426489 | 495 nt | TSL 3 BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC090617.2-201 | ENST00000433167 | 404 nt | TSL 3 BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC007389.2-201 | ENST00000434630 | 306 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC074367.1-201 | ENST00000438685 | 1125 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | MTCYBP12-201 | ENST00000440559 | 1134 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RRM2P4-201 | ENST00000441721 | 562 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC003991.1-202 | ENST00000447058 | 777 nt | TSL 3 BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC010655.1-201 | ENST00000449336 | 292 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | UBDP1-202 | ENST00000457888 | 382 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC107021.1-202 | ENST00000480247 | 555 nt | TSL 5 BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC108748.1-201 | ENST00000487772 | 515 nt | TSL 3 BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC026402.1-201 | ENST00000513642 | 170 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RNA5SP208-201 | ENST00000516156 | 78 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RNU2-58P-201 | ENST00000516403 | 183 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| MUC1 | P15941 | IGKV3OR22-2-201 | ENST00000517943 | 313 nt | BASIC | 3.11 | □□□□□ -1.91 | | |