Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.26□□□□□ -1.57
COL6A2P12110 RPL7P22-201ENST00000466005 733 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL6A2P12110 AC087312.1-201ENST00000471411 480 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 RPS3AP14-201ENST00000483907 780 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 AC058823.1-201ENST00000485315 474 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL6A2P12110 AC090453.1-201ENST00000495560 436 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.26□□□□□ -1.57
COL6A2P12110 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.26□□□□□ -1.57
COL6A2P12110 AC010493.1-201ENST00000513479 292 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.26□□□□□ -1.57
COL6A2P12110 FAM92A1P1-201ENST00000528023 890 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 AP004607.2-201ENST00000533949 322 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.26□□□□□ -1.57
COL6A2P12110 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.26□□□□□ -1.57
COL6A2P12110 CKS1BP3-201ENST00000600888 237 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 AC011626.1-201ENST00000604710 562 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 AC008945.2-201ENST00000606056 604 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.26□□□□□ -1.57
COL6A2P12110 AC063943.3-201ENST00000615562 356 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 AP005264.7-201ENST00000625003 745 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 AC110994.2-201ENST00000635481 492 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 MIR4302-201ENST00000638058 60 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.26□□□□□ -1.57
COL6A2P12110 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COL6A2P12110 AC083843.3-201ENST00000623679 2186 ntBASIC5.26□□□□□ -1.57
COL6A2P12110 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL6A2P12110 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.26□□□□□ -1.57
COL6A2P12110 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL6A2P12110 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.26□□□□□ -1.57
COL6A2P12110 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
COL6A2P12110 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.25□□□□□ -1.57
COL6A2P12110 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL6A2P12110 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.25□□□□□ -1.57
COL6A2P12110 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL6A2P12110 AL034549.2-201ENST00000618285 3373 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL6A2P12110 CCT4P2-201ENST00000233836 1548 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL6A2P12110 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
COL6A2P12110 Y_RNA.11-201ENST00000362375 109 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 RNU1-85P-201ENST00000364127 164 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 RNY4P34-201ENST00000364779 95 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 SNORA51.6-201ENST00000384151 125 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 SNORA16A-201ENST00000384342 137 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 MIR589-201ENST00000385238 99 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.25□□□□□ -1.57
COL6A2P12110 AC012498.1-201ENST00000424037 437 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.25□□□□□ -1.57
COL6A2P12110 RPEP2-201ENST00000432149 701 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 RPL34P6-201ENST00000432390 345 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AL161722.2-201ENST00000434731 981 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 YWHAZP8-201ENST00000436935 731 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.25□□□□□ -1.57
COL6A2P12110 AC073109.1-201ENST00000445066 978 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.25□□□□□ -1.57
COL6A2P12110 AC245028.2-201ENST00000458673 253 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.25□□□□□ -1.57
COL6A2P12110 MTCYBP18-201ENST00000501056 747 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.25□□□□□ -1.57
COL6A2P12110 AC098799.2-201ENST00000509466 868 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 RNU6-358P-201ENST00000516564 75 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 RN7SKP99-201ENST00000517028 307 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.25□□□□□ -1.57
COL6A2P12110 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.25□□□□□ -1.57
COL6A2P12110 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.25□□□□□ -1.57
COL6A2P12110 AC109635.3-201ENST00000529536 185 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 ZNF705CP-201ENST00000530515 889 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AK6P1-201ENST00000540219 478 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 CENPUP2-201ENST00000555897 1186 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AL157394.1-201ENST00000562983 1224 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AL133457.1-201ENST00000564251 987 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.25□□□□□ -1.57
COL6A2P12110 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.25□□□□□ -1.57
COL6A2P12110 FGF7P1-201ENST00000582820 288 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.25□□□□□ -1.57
COL6A2P12110 AC008752.3-201ENST00000588113 712 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.25□□□□□ -1.57
COL6A2P12110 HMGN1P30-201ENST00000589286 268 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AC008521.2-201ENST00000591021 259 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AC245014.2-201ENST00000603689 287 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AC007363.1-201ENST00000604736 620 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AL353621.2-201ENST00000605340 133 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 AC246785.4-201ENST00000605374 287 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.25□□□□□ -1.57
COL6A2P12110 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.25□□□□□ -1.57
COL6A2P12110 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.25□□□□□ -1.57
COL6A2P12110 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL6A2P12110 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.25□□□□□ -1.57
COL6A2P12110 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL6A2P12110 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL6A2P12110 AL138820.1-201ENST00000617901 5305 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.25□□□□□ -1.57
COL6A2P12110 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
COL6A2P12110 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL6A2P12110 AL022578.1-201ENST00000439330 1433 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms