Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC019080.5-201ENST00000624891 757 ntBASIC2.9□□□□□ -1.94
FREM3P0C091 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
FREM3P0C091 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
FREM3P0C091 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.94
FREM3P0C091 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
FREM3P0C091 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
FREM3P0C091 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.9□□□□□ -1.95
FREM3P0C091 SNORD56.3-201ENST00000363507 71 ntBASIC2.9□□□□□ -1.95
FREM3P0C091 RNU6-178P-201ENST00000384631 104 ntBASIC2.9□□□□□ -1.95
FREM3P0C091 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.9□□□□□ -1.95
FREM3P0C091 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
FREM3P0C091 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.9□□□□□ -1.95
FREM3P0C091 AC004801.2-202ENST00000463559 283 ntBASIC2.9□□□□□ -1.95
FREM3P0C091 RPS4XP22-201ENST00000480755 780 ntBASIC2.9□□□□□ -1.95
FREM3P0C091 RPL32P34-201ENST00000486380 400 ntBASIC2.9□□□□□ -1.95
FREM3P0C091 RFPL1S-203ENST00000539579 330 ntBASIC2.9□□□□□ -1.95
FREM3P0C091 NCAPGP2-201ENST00000557911 754 ntBASIC2.9□□□□□ -1.95
FREM3P0C091 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.9□□□□□ -1.95
FREM3P0C091 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.9□□□□□ -1.95
FREM3P0C091 AC090971.4-201ENST00000560291 1800 ntBASIC2.9□□□□□ -1.95
FREM3P0C091 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
FREM3P0C091 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
FREM3P0C091 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
FREM3P0C091 RPL7P26-201ENST00000333817 754 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 AL122016.1-201ENST00000403365 367 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 RPL35AP12-201ENST00000425362 338 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 RPS4XP13-201ENST00000483219 789 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.89□□□□□ -1.95
FREM3P0C091 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC2.89□□□□□ -1.95
FREM3P0C091 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.89□□□□□ -1.95
FREM3P0C091 AC026801.2-201ENST00000515352 425 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 RNU6-943P-201ENST00000516960 98 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 AC092868.3-201ENST00000560515 784 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 AC093311.1-201ENST00000506586 2021 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 GSTA8P-201ENST00000404253 637 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 HSFY1P1-201ENST00000423928 1178 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 AC236972.1-201ENST00000433225 199 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.89□□□□□ -1.95
FREM3P0C091 AL136097.1-201ENST00000456945 913 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 AC010468.1-201ENST00000461022 817 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 PTGES3P3-201ENST00000511479 482 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 snoU109.6-201ENST00000516831 118 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 MIR2276-201ENST00000516886 89 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 AC107934.2-201ENST00000518653 310 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
FREM3P0C091 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.89□□□□□ -1.95
FREM3P0C091 BMS1P7-201ENST00000602440 1052 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 AC015871.2-201ENST00000603605 948 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 AC010809.3-201ENST00000621310 641 ntBASIC2.89□□□□□ -1.95
FREM3P0C091 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
FREM3P0C091 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
FREM3P0C091 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
FREM3P0C091 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.88□□□□□ -1.95
FREM3P0C091 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC2.88□□□□□ -1.95
FREM3P0C091 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
FREM3P0C091 RNU1-87P-201ENST00000363727 170 ntBASIC2.88□□□□□ -1.95
FREM3P0C091 RNA5SP293-201ENST00000410527 113 ntBASIC2.88□□□□□ -1.95
FREM3P0C091 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.88□□□□□ -1.95
FREM3P0C091 AC093698.1-201ENST00000423843 571 ntBASIC2.88□□□□□ -1.95
FREM3P0C091 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.88□□□□□ -1.95
FREM3P0C091 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.88□□□□□ -1.95
FREM3P0C091 CST9LP2-201ENST00000437612 320 ntBASIC2.88□□□□□ -1.95
FREM3P0C091 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.88□□□□□ -1.95
FREM3P0C091 RSL24D1P3-201ENST00000449255 495 ntBASIC2.88□□□□□ -1.95
FREM3P0C091 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.88□□□□□ -1.95
FREM3P0C091 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.88□□□□□ -1.95
FREM3P0C091 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.88□□□□□ -1.95
FREM3P0C091 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC2.88□□□□□ -1.95
FREM3P0C091 RNU1-103P-201ENST00000516502 125 ntBASIC2.88□□□□□ -1.95
FREM3P0C091 AC104027.1-201ENST00000521887 300 ntBASIC2.88□□□□□ -1.95
FREM3P0C091 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
FREM3P0C091 AC006518.1-201ENST00000541449 943 ntBASIC2.88□□□□□ -1.95
FREM3P0C091 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.88□□□□□ -1.95
FREM3P0C091 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.88□□□□□ -1.95
FREM3P0C091 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC2.88□□□□□ -1.95
FREM3P0C091 AL162274.2-201ENST00000614406 332 ntBASIC2.88□□□□□ -1.95
FREM3P0C091 AL356490.1-201ENST00000623079 479 ntBASIC2.88□□□□□ -1.95
FREM3P0C091 AC006386.2-201ENST00000624491 75 ntBASIC2.88□□□□□ -1.95
FREM3P0C091 AC012005.1-201ENST00000624575 75 ntBASIC2.88□□□□□ -1.95
FREM3P0C091 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
FREM3P0C091 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.88□□□□□ -1.95
FREM3P0C091 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
FREM3P0C091 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.88□□□□□ -1.95
FREM3P0C091 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
FREM3P0C091 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
FREM3P0C091 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.87□□□□□ -1.95
FREM3P0C091 AC234772.1-201ENST00000377927 937 ntBASIC2.87□□□□□ -1.95
FREM3P0C091 OR6C71P-201ENST00000432580 913 ntBASIC2.87□□□□□ -1.95
FREM3P0C091 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC2.87□□□□□ -1.95
FREM3P0C091 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.87□□□□□ -1.95
FREM3P0C091 RPL6P9-201ENST00000466502 859 ntBASIC2.87□□□□□ -1.95
FREM3P0C091 AC119751.5-201ENST00000514077 770 ntBASIC2.87□□□□□ -1.95
FREM3P0C091 RN7SKP132-201ENST00000516001 208 ntBASIC2.87□□□□□ -1.95
FREM3P0C091 AP001207.2-201ENST00000519490 539 ntBASIC2.87□□□□□ -1.95
FREM3P0C091 AC068657.1-201ENST00000520807 306 ntBASIC2.87□□□□□ -1.95
FREM3P0C091 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.87□□□□□ -1.95
FREM3P0C091 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.87□□□□□ -1.95
FREM3P0C091 SNORD39.2-201ENST00000579995 76 ntBASIC2.87□□□□□ -1.95
FREM3P0C091 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms