Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AL118496.1-201ENST00000440201 1812 ntBASIC3.21□□□□□ -1.89
HLA-DPB1P04440 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
HLA-DPB1P04440 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 HSPA8P19-201ENST00000505359 1517 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 OR4A15-201ENST00000314706 1035 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 RNU6-543P-201ENST00000362576 108 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 U3.39-201ENST00000408569 239 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 RN7SKP156-201ENST00000410308 342 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC234782.4-201ENST00000417646 1048 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 RPS12P23-201ENST00000419579 400 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AL139247.1-201ENST00000422768 325 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 RWDD4P2-201ENST00000426392 563 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC005189.1-201ENST00000431286 310 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 RPL21P133-201ENST00000443666 476 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 HMGB3P8-201ENST00000449709 577 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AL136097.1-201ENST00000456945 913 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 RPS4XP2-201ENST00000458402 793 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 RN7SL442P-201ENST00000473804 320 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 RWDD4P1-201ENST00000488019 565 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC068305.1-201ENST00000497406 726 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AL035404.1-201ENST00000497982 568 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC010468.3-201ENST00000508225 458 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 COL6A4P2-205ENST00000509855 506 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC025768.1-201ENST00000510057 267 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 OR7E13P-201ENST00000526052 910 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 OR4A2P-201ENST00000527276 913 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 PDCL2P2-201ENST00000533651 189 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC012254.4-201ENST00000588843 273 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC079610.2-201ENST00000604818 690 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AP000553.6-201ENST00000641242 118 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AC024560.2-201ENST00000507981 1497 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 AL513302.2-201ENST00000562313 1842 ntBASIC3.21□□□□□ -1.9
HLA-DPB1P04440 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.21□□□□□ -1.9
HLA-DPB1P04440 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC134882.1-201ENST00000603738 1676 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 ASNSP1-204ENST00000641977 1664 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 SNORA73.2-201ENST00000364946 201 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 RNU6-805P-201ENST00000365643 106 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 SOD2P1-201ENST00000396543 562 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 RNA5SP31-201ENST00000411144 127 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC004022.2-201ENST00000413824 193 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 RPS7P13-201ENST00000413955 498 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC093578.1-201ENST00000415219 368 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AL031736.2-201ENST00000426573 787 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AL591419.1-201ENST00000427423 339 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC010655.1-201ENST00000449336 292 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AL353718.1-201ENST00000451028 517 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 UBDP1-202ENST00000457888 382 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC007537.2-201ENST00000472093 511 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC084357.1-201ENST00000473404 255 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 SNORA76.2-201ENST00000517095 137 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms