Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 OR4A12P-201ENST00000530847 918 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AL356218.2-201ENST00000605264 187 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 RPL21P136-201ENST00000605378 396 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AC112503.2-201ENST00000609005 552 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AL121890.3-201ENST00000618494 516 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AC004943.3-201ENST00000624116 600 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 DCAF13P3-201ENST00000561147 1334 ntBASIC2.84□□□□□ -1.96
HLA-DQA1P01909 EIF2AP4-201ENST00000424793 1781 ntBASIC2.84□□□□□ -1.96
HLA-DQA1P01909 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.84□□□□□ -1.96
HLA-DQA1P01909 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DQA1P01909 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DQA1P01909 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DQA1P01909 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 API5-210ENST00000534600 1760 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 RNA5SP235-201ENST00000365411 114 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 U1.1-201ENST00000384101 164 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 MIR124-3-201ENST00000384866 87 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 SNORA40.4-201ENST00000390971 128 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 RNA5SP293-201ENST00000410527 113 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 RN7SKP182-201ENST00000410772 298 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 ELOCP19-201ENST00000411919 318 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 NRBF2P2-201ENST00000413087 861 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 MTATP6P19-201ENST00000413797 659 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 RPS15AP40-201ENST00000419621 391 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC008065.1-201ENST00000428525 348 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AL158053.1-201ENST00000441503 453 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 RPS4XP4-201ENST00000443195 763 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC125238.1-201ENST00000448842 249 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC233982.1-201ENST00000451247 436 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 RN7SL303P-201ENST00000469773 251 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 RN7SL442P-201ENST00000473804 320 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 RN7SL481P-201ENST00000477764 299 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 RPS27P23-201ENST00000487608 251 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AP001086.1-201ENST00000494882 321 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC020893.1-201ENST00000502452 580 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 RN7SKP277-201ENST00000516895 283 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 RN7SKP234-201ENST00000517173 224 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AF279873.1-201ENST00000523393 313 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 OR4R2P-201ENST00000530815 597 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC004024.1-201ENST00000549244 247 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC023824.3-201ENST00000569003 562 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 MIR4700-201ENST00000578311 74 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 MIR4284-201ENST00000578924 81 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 MIR5096-201ENST00000583713 70 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC091488.1-201ENST00000604239 660 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC107294.3-201ENST00000609211 526 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AC012531.5-201ENST00000611375 151 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AL109659.3-201ENST00000624985 950 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 ZNF826P-207ENST00000622273 1910 ntBASIC2.83□□□□□ -1.96
HLA-DQA1P01909 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DQA1P01909 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 XPOTP1-201ENST00000443317 2398 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC046144.1-201ENST00000478559 1853 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 MIR525-201ENST00000384978 85 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 U3.22-201ENST00000391120 215 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 DNAJC19P6-201ENST00000401853 280 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 RNU6-272P-201ENST00000411028 104 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 RPS7P13-201ENST00000413955 498 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DQA1P01909 NUP35P2-201ENST00000416748 943 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC245291.1-201ENST00000419501 328 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 PAICSP7-201ENST00000419829 962 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC246680.2-201ENST00000422106 389 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 AC092832.1-201ENST00000422934 400 ntBASIC2.82□□□□□ -1.96
HLA-DQA1P01909 FO393414.1-201ENST00000428697 1184 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms