Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRBV12-3P01733 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRBV12-3P01733 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRBV12-3P01733 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.92□□□□□ -1.94
TRBV12-3P01733 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRBV12-3P01733 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRBV12-3P01733 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TRBV12-3P01733 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 AP004289.2-201ENST00000444413 1457 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC024560.2-201ENST00000507981 1497 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 GABPAP-201ENST00000419271 1356 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 EXOC5P1-201ENST00000510543 1969 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC006504.1-201ENST00000562493 3666 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 SNORA31-201ENST00000362607 130 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 RNU6-1243P-201ENST00000364028 107 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 RNA5SP189-201ENST00000364920 115 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 RNU6-272P-201ENST00000411028 104 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AL158825.1-201ENST00000414735 521 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC005517.2-201ENST00000424673 553 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AL591419.1-201ENST00000427423 339 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 KCTD10P1-201ENST00000434203 625 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 RPL6P5-201ENST00000445678 828 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 NPM1P49-201ENST00000448027 714 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 HMGN2P7-201ENST00000456186 273 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 UBDP1-202ENST00000457888 382 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AL672167.3-201ENST00000465951 960 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC091959.2-201ENST00000477363 321 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 TMED11P-201ENST00000479478 690 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC108941.1-201ENST00000502853 530 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TRBV12-3P01733 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 SNORA76.2-201ENST00000517095 137 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 LINC00557-201ENST00000563184 1279 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 MTCYBP28-201ENST00000566728 1132 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 MIR4504-201ENST00000577413 92 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC090616.5-202ENST00000582111 297 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC012254.4-201ENST00000588843 273 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 AC008687.2-201ENST00000597865 520 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AL390816.3-201ENST00000604527 1066 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 HMGN2P28-201ENST00000606102 262 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 AL161637.1-201ENST00000622380 412 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 AL109659.3-201ENST00000624985 950 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 MIR4278-201ENST00000636094 69 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TRBV12-3P01733 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRBV12-3P01733 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TRBV12-3P01733 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TRBV12-3P01733 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 SAGE4P-201ENST00000442271 3381 ntBASIC2.91□□□□□ -1.94
TRBV12-3P01733 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
TRBV12-3P01733 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.94
TRBV12-3P01733 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.9□□□□□ -1.94
TRBV12-3P01733 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
TRBV12-3P01733 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.9□□□□□ -1.95
TRBV12-3P01733 AC106871.1-201ENST00000568324 3102 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.9□□□□□ -1.95
TRBV12-3P01733 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TRBV12-3P01733 AL589826.1-201ENST00000340697 249 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 RNU1-64P-201ENST00000365443 163 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 U8.11-201ENST00000384699 133 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 U8.12-201ENST00000384701 133 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 RPL7P60-201ENST00000397636 735 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 EIF5P1-201ENST00000400019 1231 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 HLFP1-201ENST00000402375 499 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 ATF1P1-201ENST00000406040 927 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.9□□□□□ -1.95
TRBV12-3P01733 MIR1250-201ENST00000408098 113 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 RNU2-37P-201ENST00000410695 177 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 AC069218.2-201ENST00000411665 344 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 AMD1P2-201ENST00000412936 992 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.9□□□□□ -1.95
TRBV12-3P01733 HMGB3P5-201ENST00000428894 612 ntBASIC2.9□□□□□ -1.95
TRBV12-3P01733 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms