Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 AL034351.1-201ENST00000605288 668 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 MIR6748-201ENST00000610433 71 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AC017037.3-201ENST00000625016 472 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AC244205.2-202ENST00000635781 342 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 ATE1-AS1-202ENST00000636460 506 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
CLPTM1O96005 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLPTM1O96005 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLPTM1O96005 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLPTM1O96005 AC108467.2-201ENST00000617640 1597 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLPTM1O96005 MTND4P31-201ENST00000425607 1343 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLPTM1O96005 MFSD8-216ENST00000641147 4009 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLPTM1O96005 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLPTM1O96005 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLPTM1O96005 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLPTM1O96005 NACA3P-201ENST00000359690 648 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 snoZ40.1-201ENST00000364540 72 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 OR1L1-202ENST00000373686 1083 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 RNU6-317P-201ENST00000384031 107 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLPTM1O96005 AL590084.1-201ENST00000407885 387 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.97□□□□□ -1.77
CLPTM1O96005 RNU6-575P-201ENST00000411326 105 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 RPS20P14-201ENST00000412545 360 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 RPF2P1-201ENST00000424137 906 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 OR5AW1P-201ENST00000426334 1006 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 IFNNP1-201ENST00000429219 553 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.97□□□□□ -1.77
CLPTM1O96005 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.97□□□□□ -1.77
CLPTM1O96005 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 CBX1P4-201ENST00000439415 457 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AL138878.2-201ENST00000440581 1241 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 ARL2BPP10-201ENST00000446487 531 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CLPTM1O96005 SNORD108-201ENST00000459332 71 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 RN7SL93P-201ENST00000463035 293 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 RPL23AP12-201ENST00000467573 473 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 PRDX3P4-201ENST00000470828 747 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLPTM1O96005 RN7SL459P-201ENST00000481078 302 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AP000563.1-201ENST00000490865 758 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 AC007016.1-201ENST00000512110 244 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 IGKV2-38-201ENST00000517443 247 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLPTM1O96005 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.97□□□□□ -1.77
CLPTM1O96005 AC092747.2-201ENST00000545069 983 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.97□□□□□ -1.77
CLPTM1O96005 DUXAP6-201ENST00000553858 601 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 AADACP1-206ENST00000561502 1193 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.97□□□□□ -1.77
CLPTM1O96005 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.97□□□□□ -1.77
CLPTM1O96005 MTND4LP24-201ENST00000572277 291 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AP001180.3-201ENST00000582221 145 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLPTM1O96005 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.97□□□□□ -1.77
CLPTM1O96005 AC021171.1-201ENST00000603137 706 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AP005137.2-201ENST00000609238 400 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLPTM1O96005 AC099669.2-201ENST00000616549 437 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AP000346.3-201ENST00000622821 210 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 AC092608.3-201ENST00000625017 386 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.97□□□□□ -1.77
CLPTM1O96005 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLPTM1O96005 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLPTM1O96005 AC006971.1-201ENST00000407916 4486 ntBASIC3.97□□□□□ -1.77
CLPTM1O96005 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
CLPTM1O96005 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLPTM1O96005 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLPTM1O96005 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLPTM1O96005 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLPTM1O96005 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CLPTM1O96005 ZNF137P-201ENST00000456718 1920 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLPTM1O96005 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AC021146.4-201ENST00000309229 279 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 RNU6-1214P-201ENST00000363650 109 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 SNORD113.2-201ENST00000364166 89 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 SNORA71.2-201ENST00000364941 134 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms