Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RNU6-352P-201ENST00000516908 107 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 SNORA76.2-201ENST00000517095 137 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN9O95484 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN9O95484 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN9O95484 AC074029.1-201ENST00000552531 1044 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 SERPINE4P-201ENST00000554978 281 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 AGGF1P8-201ENST00000562979 1000 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN9O95484 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN9O95484 AC022916.3-201ENST00000592961 742 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 KLKP1-201ENST00000595979 403 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 AC121761.2-201ENST00000617300 689 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 MIR6875-201ENST00000617506 72 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN9O95484 AC018926.3-201ENST00000618841 406 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 C2orf27A-204ENST00000623058 969 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN9O95484 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN9O95484 OR6C71P-202ENST00000641886 1107 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN9O95484 SEC63P2-201ENST00000503863 1939 ntBASIC3.6□□□□□ -1.83
CLDN9O95484 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN9O95484 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CLDN9O95484 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN9O95484 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN9O95484 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN9O95484 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
CLDN9O95484 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN9O95484 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN9O95484 AL391417.1-201ENST00000404100 426 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 PPIAP31-201ENST00000405422 495 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 AC009237.5-201ENST00000414271 501 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 AL158825.1-201ENST00000414735 521 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN9O95484 AC006946.1-201ENST00000429106 328 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 PSMA2P3-201ENST00000429685 675 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN9O95484 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN9O95484 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN9O95484 AC233982.1-201ENST00000451247 436 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 SNRPGP5-201ENST00000456003 220 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN9O95484 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN9O95484 AL139099.1-201ENST00000497398 403 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN9O95484 FTH1P9-201ENST00000513251 355 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN9O95484 AC008489.1-201ENST00000524271 483 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.59□□□□□ -1.83
CLDN9O95484 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN9O95484 OSBPL9P3-201ENST00000534523 595 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CLDN9O95484 CENPUP2-201ENST00000555897 1186 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN9O95484 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.59□□□□□ -1.83
CLDN9O95484 AC141257.3-201ENST00000572906 215 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 MIR4286-201ENST00000580651 93 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 AC053481.4-201ENST00000583164 216 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN9O95484 AC005344.1-201ENST00000613391 459 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 FRG1HP-204ENST00000617940 757 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 AL163051.2-201ENST00000618976 735 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.59□□□□□ -1.83
CLDN9O95484 AL354798.1-201ENST00000622505 329 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 AC020978.9-201ENST00000624380 1141 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN9O95484 AC017104.5-201ENST00000637647 639 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN9O95484 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN9O95484 MAPK10-372ENST00000641954 3413 ntBASIC3.59□□□□□ -1.83
CLDN9O95484 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.59□□□□□ -1.84
CLDN9O95484 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN9O95484 AC024560.2-201ENST00000507981 1497 ntBASIC3.59□□□□□ -1.84
CLDN9O95484 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
CLDN9O95484 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN9O95484 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN9O95484 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN9O95484 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN9O95484 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN9O95484 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN9O95484 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN9O95484 AL512646.1-201ENST00000269395 1077 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN9O95484 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN9O95484 MIR30B-201ENST00000384850 88 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN9O95484 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN9O95484 VN1R42P-201ENST00000424651 344 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN9O95484 AL591419.1-201ENST00000427423 339 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 AC073508.1-201ENST00000428866 656 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 OR51AB1P-201ENST00000429046 620 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 ETF1P3-201ENST00000430422 1160 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 NDUFB1P1-201ENST00000435191 180 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 RPS29P7-201ENST00000439662 171 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN9O95484 DNAJC19P8-201ENST00000452887 259 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms