Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 MIR92A2-201ENST00000385299 75 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4BO75351 RPS16P5-201ENST00000406501 404 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 SNORA77-201ENST00000408716 125 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS4BO75351 AC073264.1-201ENST00000411508 416 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS4BO75351 GJA6P-201ENST00000415117 1042 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS4BO75351 AL158073.1-201ENST00000426848 1104 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 RPL37P1-201ENST00000432310 284 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 Z74696.2-201ENST00000436514 498 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS4BO75351 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS4BO75351 BMI1P1-201ENST00000445879 941 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 COX6CP12-201ENST00000446748 202 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 AL354714.3-201ENST00000447284 493 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS4BO75351 RPL23AP15-201ENST00000450202 459 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.83□□□□□ -1.64
VPS4BO75351 HMGN3P1-201ENST00000453847 193 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 AC007537.2-201ENST00000472093 511 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 AC011825.1-201ENST00000484967 388 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 AC107401.1-201ENST00000503426 685 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
VPS4BO75351 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS4BO75351 AC006499.2-201ENST00000513470 337 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 RN7SKP260-201ENST00000516907 149 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 SOD1P3-201ENST00000518682 454 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS4BO75351 OR5M2P-201ENST00000529003 936 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS4BO75351 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.83□□□□□ -1.64
VPS4BO75351 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS4BO75351 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS4BO75351 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS4BO75351 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS4BO75351 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS4BO75351 PCMTD1P2-201ENST00000565017 355 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4BO75351 AC073648.5-201ENST00000603502 305 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 AC104687.2-201ENST00000604442 342 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS4BO75351 AC073968.1-201ENST00000618594 637 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 AC018755.4-201ENST00000619715 454 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 AL049536.1-201ENST00000625043 744 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS4BO75351 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.83□□□□□ -1.64
VPS4BO75351 AL079343.1-201ENST00000572358 1771 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4BO75351 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS4BO75351 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VPS4BO75351 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4BO75351 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS4BO75351 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4BO75351 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS4BO75351 OR4G11P-202ENST00000642116 1414 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS4BO75351 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4BO75351 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4BO75351 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4BO75351 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VPS4BO75351 AC016716.1-201ENST00000265882 708 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 SNURFL-201ENST00000309296 343 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 RNU6-444P-201ENST00000383988 108 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 RNA5SP87-201ENST00000384155 118 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 RNY3P10-201ENST00000384764 102 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AC007066.1-201ENST00000392902 381 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VPS4BO75351 RN7SKP114-201ENST00000410327 279 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4BO75351 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4BO75351 AC119751.6-201ENST00000416712 186 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS4BO75351 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4BO75351 AC004448.2-201ENST00000422360 586 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS4BO75351 EIF4HP2-201ENST00000424380 563 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4BO75351 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4BO75351 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS4BO75351 AC016712.1-201ENST00000431088 378 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS4BO75351 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4BO75351 MTCO2P3-201ENST00000442543 421 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AC011753.3-201ENST00000443436 406 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.82□□□□□ -1.64
VPS4BO75351 CDC27P1-201ENST00000445384 715 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AC243772.1-201ENST00000451620 410 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 RPL10P17-201ENST00000453852 316 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 SUMO2P2-201ENST00000456482 255 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 CFTRP1-201ENST00000456646 183 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS4BO75351 RN7SL354P-201ENST00000469282 294 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AC013828.1-201ENST00000481845 158 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 MTCYBP17-201ENST00000503579 789 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS4BO75351 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4BO75351 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms