Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL645939.1-201ENST00000453429 797 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 DDX39BP2-208ENST00000453923 258 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.45□□□□□ -1.7
SMAD6O43541 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.45□□□□□ -1.7
SMAD6O43541 RN7SL385P-201ENST00000468873 276 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SMAD6O43541 TCP11X3P-202ENST00000514289 1254 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 RN7SKP122-201ENST00000515923 296 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.45□□□□□ -1.7
SMAD6O43541 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.45□□□□□ -1.7
SMAD6O43541 OR5BC1P-201ENST00000529327 739 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.45□□□□□ -1.7
SMAD6O43541 PSMB7P1-201ENST00000556349 514 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 DUXAP1-201ENST00000556632 463 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.45□□□□□ -1.7
SMAD6O43541 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.45□□□□□ -1.7
SMAD6O43541 MIR4458-201ENST00000578872 75 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 MIR3939-201ENST00000582614 106 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.45□□□□□ -1.7
SMAD6O43541 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.45□□□□□ -1.7
SMAD6O43541 AC008759.1-201ENST00000589783 983 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 MTCO2P22-201ENST00000603246 681 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC073648.5-201ENST00000603502 305 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC021749.1-201ENST00000604322 607 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AL354984.3-201ENST00000604803 325 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC068944.2-201ENST00000610373 403 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC139769.3-201ENST00000618383 175 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.45□□□□□ -1.7
SMAD6O43541 FP325313.1-201ENST00000638228 703 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.45□□□□□ -1.7
SMAD6O43541 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMAD6O43541 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SMAD6O43541 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMAD6O43541 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMAD6O43541 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.45□□□□□ -1.7
SMAD6O43541 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
SMAD6O43541 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 AC017007.4-201ENST00000503353 1352 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 IL6STP1-201ENST00000346911 1020 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 NACA3P-201ENST00000359690 648 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.44□□□□□ -1.7
SMAD6O43541 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SMAD6O43541 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 AC098592.1-201ENST00000419352 333 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.44□□□□□ -1.7
SMAD6O43541 MTND1P4-201ENST00000435196 415 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 YWHAZP7-201ENST00000436906 631 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.44□□□□□ -1.7
SMAD6O43541 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.44□□□□□ -1.7
SMAD6O43541 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.44□□□□□ -1.7
SMAD6O43541 AC073587.1-201ENST00000447093 876 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.44□□□□□ -1.7
SMAD6O43541 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.44□□□□□ -1.7
SMAD6O43541 HMGB1P5-202ENST00000451497 985 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AC133473.1-201ENST00000455173 299 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AL109741.2-201ENST00000455561 343 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.44□□□□□ -1.7
SMAD6O43541 RPL35AP15-201ENST00000468042 339 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AC010618.1-201ENST00000469924 477 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.44□□□□□ -1.7
SMAD6O43541 RN7SL817P-201ENST00000480777 288 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AC041039.1-201ENST00000485656 536 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AC068724.1-201ENST00000487100 792 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.44□□□□□ -1.7
SMAD6O43541 AC021146.3-201ENST00000511911 260 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 RN7SKP141-201ENST00000516167 338 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 SNORA31.13-201ENST00000516624 135 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SMAD6O43541 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.44□□□□□ -1.7
SMAD6O43541 MTCYBP41-201ENST00000528913 1123 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AC092851.1-201ENST00000535964 478 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 AL121766.1-201ENST00000547436 487 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.44□□□□□ -1.7
SMAD6O43541 RPL21P7-201ENST00000557463 483 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AADACP1-206ENST00000561502 1193 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.44□□□□□ -1.7
SMAD6O43541 MIR4697-201ENST00000582977 78 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 ARF4P1-201ENST00000605447 541 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 Z98200.1-201ENST00000607298 470 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AC092794.1-201ENST00000612734 582 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AC107075.1-201ENST00000613695 314 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AC105227.2-201ENST00000615075 605 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 uc_338.9-201ENST00000617424 182 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.44□□□□□ -1.7
SMAD6O43541 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 AL590240.3-201ENST00000621416 943 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AC007546.2-201ENST00000623996 360 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AL603839.4-201ENST00000624658 1005 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 AL160394.1-201ENST00000624765 724 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms