Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC28A1O00337 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC28A1O00337 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC28A1O00337 AC110741.2-201ENST00000605278 268 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC28A1O00337 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC28A1O00337 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC28A1O00337 VN1R7P-201ENST00000619242 903 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC28A1O00337 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC28A1O00337 MTND5P3-201ENST00000438536 1800 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SLC28A1O00337 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
SLC28A1O00337 AC111188.2-201ENST00000529697 1387 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AL133412.1-201ENST00000380194 2992 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC28A1O00337 NCAPGP1-201ENST00000505112 1814 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC28A1O00337 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC28A1O00337 RNU6-441P-201ENST00000384545 106 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 HLFP1-201ENST00000402375 499 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AL355379.1-201ENST00000405542 640 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SLC28A1O00337 MIR1183-201ENST00000408856 89 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC28A1O00337 MTND4P22-201ENST00000413116 1169 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 RPL31P2-201ENST00000413849 377 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC28A1O00337 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC28A1O00337 AC009237.2-201ENST00000421358 284 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 COX6CP15-201ENST00000426313 211 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AC096632.1-201ENST00000427395 310 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AC011242.1-201ENST00000433596 1158 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC28A1O00337 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC28A1O00337 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC28A1O00337 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC28A1O00337 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC28A1O00337 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SLC28A1O00337 AC008427.1-201ENST00000503102 655 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AC004069.2-201ENST00000505438 1114 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 BTF3L4P4-201ENST00000506381 449 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC28A1O00337 AC048346.1-201ENST00000510247 144 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AC109471.1-201ENST00000511631 612 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 RNA5SP143-201ENST00000516936 115 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 NARSP2-201ENST00000518524 679 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC28A1O00337 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.8□□□□□ -1.8
SLC28A1O00337 AP003730.1-201ENST00000524605 285 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AC009643.1-201ENST00000532030 391 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 OR6C73P-201ENST00000546432 358 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC28A1O00337 AC074051.3-201ENST00000570238 358 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AC141257.3-201ENST00000572906 215 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC28A1O00337 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC28A1O00337 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC28A1O00337 AC005014.3-201ENST00000605985 190 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC28A1O00337 AL354760.1-201ENST00000608357 643 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AP000238.1-201ENST00000608759 426 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 AC018645.2-201ENST00000609151 472 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC28A1O00337 RNU6-1192P-201ENST00000612197 107 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 RNU6-489P-201ENST00000618289 107 ntBASIC3.8□□□□□ -1.8
SLC28A1O00337 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC28A1O00337 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC28A1O00337 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC28A1O00337 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A1O00337 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SLC28A1O00337 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A1O00337 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A1O00337 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A1O00337 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A1O00337 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC28A1O00337 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A1O00337 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SLC28A1O00337 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 RNU6-236P-201ENST00000363886 106 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 RNA5SP399-201ENST00000364003 117 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 RNU1-85P-201ENST00000364127 164 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 RNU6-1257P-201ENST00000384625 110 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 MIR585-201ENST00000384887 94 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 HMGN2P8-201ENST00000391458 268 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 MIR1250-201ENST00000408098 113 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 RNU6-575P-201ENST00000411326 105 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A1O00337 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A1O00337 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A1O00337 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 USP9YP7-201ENST00000436723 430 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 RANP8-201ENST00000444720 713 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 RPS17P13-201ENST00000448974 407 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 RPS11P1-201ENST00000451072 473 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 USP9YP32-201ENST00000452432 430 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms