Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.26□□□□□ -1.89
UPK1AO00322 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 AC039056.2-201ENST00000622261 511 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
UPK1AO00322 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.26□□□□□ -1.89
UPK1AO00322 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
UPK1AO00322 MFSD8-233ENST00000641482 4860 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 AC090229.1-201ENST00000590983 1609 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
UPK1AO00322 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UPK1AO00322 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UPK1AO00322 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
UPK1AO00322 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UPK1AO00322 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
UPK1AO00322 RNU4-31P-201ENST00000384211 141 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 MIR554-201ENST00000384874 96 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
UPK1AO00322 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.25□□□□□ -1.89
UPK1AO00322 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 RPL30P3-201ENST00000424262 333 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 FAR1P1-201ENST00000427163 934 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 RPL23AP82-202ENST00000427528 469 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 AC018644.1-201ENST00000429934 551 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 KCTD10P1-201ENST00000434203 625 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.25□□□□□ -1.89
UPK1AO00322 RPL21P133-201ENST00000443666 476 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.25□□□□□ -1.89
UPK1AO00322 AL133547.1-201ENST00000448546 220 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.25□□□□□ -1.89
UPK1AO00322 PPIAP3-201ENST00000450588 505 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 HMGN1P18-201ENST00000457642 277 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 CENPBD1P1-201ENST00000464061 469 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 AC106707.2-201ENST00000484182 374 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 TRAV31-201ENST00000502780 342 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.25□□□□□ -1.89
UPK1AO00322 PAICSP4-201ENST00000517543 1253 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 TRMT10BP1-201ENST00000519377 943 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.25□□□□□ -1.89
UPK1AO00322 MTCO1P49-201ENST00000523429 802 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.25□□□□□ -1.89
UPK1AO00322 TRAV11-201ENST00000539512 339 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.25□□□□□ -1.89
UPK1AO00322 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.25□□□□□ -1.89
UPK1AO00322 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.25□□□□□ -1.89
UPK1AO00322 AC037471.2-201ENST00000564941 598 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.25□□□□□ -1.89
UPK1AO00322 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.25□□□□□ -1.89
UPK1AO00322 MIR7973-1-201ENST00000614683 76 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 CR392039.5-201ENST00000623201 510 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 AL356863.1-201ENST00000623378 1080 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.25□□□□□ -1.89
UPK1AO00322 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.25□□□□□ -1.89
UPK1AO00322 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.25□□□□□ -1.89
UPK1AO00322 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.25□□□□□ -1.89
UPK1AO00322 AC009093.8-201ENST00000641769 292 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 AC007496.3-201ENST00000624987 3443 ntBASIC3.25□□□□□ -1.89
UPK1AO00322 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
UPK1AO00322 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.25□□□□□ -1.89
UPK1AO00322 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1AO00322 AL365440.1-201ENST00000436135 2167 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1AO00322 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.24□□□□□ -1.89
UPK1AO00322 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.24□□□□□ -1.89
UPK1AO00322 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.24□□□□□ -1.89
UPK1AO00322 RNU6-452P-201ENST00000384406 107 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.24□□□□□ -1.89
UPK1AO00322 AL513174.1-201ENST00000423182 629 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 ARF4P2-201ENST00000430209 526 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.24□□□□□ -1.89
UPK1AO00322 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.24□□□□□ -1.89
UPK1AO00322 RPL7P15-201ENST00000461190 712 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 AP000893.1-201ENST00000474462 794 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 HMGB1P3-201ENST00000502802 616 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.24□□□□□ -1.89
UPK1AO00322 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.24□□□□□ -1.89
UPK1AO00322 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.24□□□□□ -1.89
UPK1AO00322 FABP5P12-201ENST00000515543 389 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 AC023632.4-201ENST00000517783 191 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 AC068657.1-201ENST00000520807 306 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 AC103843.2-201ENST00000530523 682 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.24□□□□□ -1.89
UPK1AO00322 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.24□□□□□ -1.89
UPK1AO00322 AL161713.1-201ENST00000555538 145 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.24□□□□□ -1.89
UPK1AO00322 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.24□□□□□ -1.89
UPK1AO00322 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.24□□□□□ -1.89
UPK1AO00322 MIR7851-201ENST00000610611 160 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.24□□□□□ -1.89
UPK1AO00322 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1AO00322 AC012442.3-202ENST00000636742 206 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 U6.98-201ENST00000637157 84 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 RNF6P1-201ENST00000444889 1784 ntBASIC3.24□□□□□ -1.89
UPK1AO00322 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1AO00322 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
UPK1AO00322 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.24□□□□□ -1.89
UPK1AO00322 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.24□□□□□ -1.89
UPK1AO00322 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1AO00322 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms