Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU6-1293P-201ENST00000384077 107 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 ARSFP1-201ENST00000398758 477 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 SSXP10-201ENST00000402595 565 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC069218.2-201ENST00000411665 344 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC094019.1-201ENST00000434678 472 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AL138799.3-201ENST00000438968 350 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 SPRYD7P1-201ENST00000443861 570 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC104308.1-201ENST00000454621 333 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 Y_RNA.635-201ENST00000459041 101 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 PFN1P6-201ENST00000476786 399 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC006539.1-201ENST00000481419 501 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 SNRPCP11-201ENST00000492453 205 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 TTC39CP1-201ENST00000512513 755 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC093816.1-201ENST00000515076 913 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 GAPDHP62-201ENST00000515313 990 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AL358913.1-201ENST00000554342 121 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC006270.2-201ENST00000578523 652 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 POLR3GP2-201ENST00000588366 668 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC009597.2-201ENST00000604659 592 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 MIR6813-201ENST00000621638 56 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 RNU6-156P-201ENST00000621869 107 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AL133216.2-202ENST00000634512 349 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AL445437.1-201ENST00000623157 3087 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 AC006206.1-201ENST00000544842 3387 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 HSPE1P11-201ENST00000339579 310 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 MIR369-201ENST00000362155 70 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 RNU6-254P-201ENST00000363377 107 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 U3.11-201ENST00000364476 212 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 U3.12-201ENST00000364498 214 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 AC092634.1-201ENST00000366505 199 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 RNU6-38P-201ENST00000384085 107 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 RNU6-1013P-201ENST00000384180 107 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 Y_RNA.530-201ENST00000384587 101 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 SNORD94-201ENST00000386037 137 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 AL033519.1-201ENST00000407266 307 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 AC079809.1-201ENST00000415468 276 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 AL663074.2-201ENST00000440621 479 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 AL445991.1-201ENST00000450381 475 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 AL034369.1-201ENST00000453808 477 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 RNU7-182P-201ENST00000459009 62 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 RNU6-333P-201ENST00000459117 107 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 MTND4P17-201ENST00000470444 350 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 AC126389.1-201ENST00000477436 290 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 AC027575.1-201ENST00000481064 460 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 AC009567.2-201ENST00000502989 349 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 GLUD1P3-202ENST00000508551 200 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.14□□□□□ -1.59
SHISA3A0PJX4 snoU109.6-201ENST00000516831 118 ntBASIC5.14□□□□□ -1.59
SHISA3A0PJX4 Y_RNA.718-201ENST00000517110 102 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms