Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AF186190.1-201ENST00000517470 480 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC092747.2-201ENST00000545069 983 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AL442163.2-201ENST00000553912 710 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 VN1R83P-201ENST00000595685 445 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 BNIP3P33-201ENST00000598912 569 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AL592148.2-201ENST00000612210 372 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC013470.4-201ENST00000619978 986 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 MIR7702-201ENST00000621931 59 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AL354798.1-201ENST00000622505 329 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 OR1S1-201ENST00000624470 978 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AP005264.7-201ENST00000625003 745 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 OR8B1P-202ENST00000641132 1178 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AL596275.2-204ENST00000641628 552 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 OR6C71P-202ENST00000641886 1107 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AL596275.2-206ENST00000641957 626 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AP001273.1-201ENST00000624493 3152 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC027290.2-201ENST00000623210 18662 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC105074.1-201ENST00000623380 3095 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 PHKBP1-201ENST00000450951 1951 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 SGO1P1-201ENST00000603525 1447 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC011155.1-201ENST00000316512 456 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 RNU6-213P-201ENST00000384051 104 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 PGBD4P8-201ENST00000412993 562 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 Z75741.2-201ENST00000417272 1167 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 RPF2P1-201ENST00000424137 906 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC009965.2-201ENST00000425328 970 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC007389.2-201ENST00000434630 306 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC092013.1-201ENST00000438795 332 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 ARL4AP3-201ENST00000441452 574 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC006511.1-201ENST00000470614 315 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 RPS27P23-201ENST00000487608 251 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC009097.3-201ENST00000563557 1018 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC090312.1-201ENST00000580637 348 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC107982.3-201ENST00000584957 985 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC112200.1-201ENST00000625015 234 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AC087821.2-201ENST00000637086 450 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 MFSD8-245ENST00000641743 948 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 AL445437.1-201ENST00000623157 3087 ntBASIC4.24□□□□□ -1.73
YIPF1Q9Y548 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
YIPF1Q9Y548 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
YIPF1Q9Y548 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.23□□□□□ -1.73
YIPF1Q9Y548 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
YIPF1Q9Y548 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
YIPF1Q9Y548 AC022031.1-201ENST00000585985 2593 ntBASIC4.23□□□□□ -1.73
YIPF1Q9Y548 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.23□□□□□ -1.73
YIPF1Q9Y548 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
YIPF1Q9Y548 MIR16-1-201ENST00000385271 89 ntBASIC4.23□□□□□ -1.73
YIPF1Q9Y548 RNA5SP372-201ENST00000390836 115 ntBASIC4.23□□□□□ -1.73
YIPF1Q9Y548 SNORA40.2-201ENST00000390847 128 ntBASIC4.23□□□□□ -1.73
YIPF1Q9Y548 MTCO2P31-201ENST00000402702 684 ntBASIC4.23□□□□□ -1.73
YIPF1Q9Y548 GSTA8P-201ENST00000404253 637 ntBASIC4.23□□□□□ -1.73
YIPF1Q9Y548 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.23□□□□□ -1.73
YIPF1Q9Y548 PAICSP7-201ENST00000419829 962 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms