Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC126915.2-201ENST00000610957 190 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC009318.4-201ENST00000620496 486 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 U6.101-201ENST00000637707 76 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 MTCO1P12-201ENST00000414273 1543 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 HSPA8P18-201ENST00000439846 1928 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC010329.1-201ENST00000593903 8328 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
ZC3H4Q9UPT8 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
ZC3H4Q9UPT8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
ZC3H4Q9UPT8 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 RNU6-249P-201ENST00000363016 102 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AP003170.5-201ENST00000397185 335 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AL031679.1-201ENST00000400616 525 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 Y_RNA.605-201ENST00000410577 105 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 RNU2-39P-201ENST00000410604 198 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AC078974.1-201ENST00000411597 223 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AC113618.1-201ENST00000416747 285 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 RPS15AP12-201ENST00000419498 388 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 CYP4F30P-202ENST00000420048 405 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AL450023.1-201ENST00000450868 751 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 HMGN2P26-201ENST00000463169 339 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 RPL7P22-201ENST00000466005 733 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AC009120.1-201ENST00000493458 473 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 HSPE1P3-201ENST00000559254 309 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AC018552.1-201ENST00000562099 811 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 MIR3118-1-201ENST00000581787 76 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AC021646.1-201ENST00000605469 484 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AL080274.1-201ENST00000605565 220 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AL627309.6-201ENST00000606857 840 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AC015712.7-201ENST00000615211 635 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 AC012618.3-205ENST00000637896 1496 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 TCP11X1-202ENST00000622971 1372 ntBASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
ZC3H4Q9UPT8 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 RNU6-1097P-201ENST00000363586 107 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 RNU1-146P-201ENST00000364015 165 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 Y_RNA.231-201ENST00000364358 102 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 RNU6-169P-201ENST00000365336 107 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 SNORA70H-201ENST00000383910 135 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 RNU6-444P-201ENST00000383988 108 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 SNORA70J-201ENST00000384182 135 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 RPL31P52-201ENST00000407532 367 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms