Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 AC005345.1-201ENST00000431868 217 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AL049745.1-201ENST00000433953 286 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 HMGB1P12-201ENST00000438594 598 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AL772161.1-201ENST00000439130 476 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 RPL7P22-201ENST00000466005 733 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 RPL35AP15-201ENST00000468042 339 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC004453.1-201ENST00000487895 408 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 RNA5SP135-201ENST00000517019 125 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 SNORA31.20-201ENST00000517111 133 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC010476.1-201ENST00000519111 851 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 EDDM3DP-201ENST00000554692 434 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC009117.1-201ENST00000563948 554 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 RPL23AP97-201ENST00000568955 471 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 MTND4LP25-201ENST00000570218 163 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AL445222.1-201ENST00000607259 628 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AP000238.1-201ENST00000608759 426 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC090510.2-201ENST00000617465 629 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC073968.1-201ENST00000618594 637 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC019278.1-201ENST00000623516 479 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC139713.2-210ENST00000641741 992 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC010928.1-201ENST00000592477 1447 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC131971.1-201ENST00000332881 1482 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC092326.2-201ENST00000624772 1561 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 PRO1804-201ENST00000623780 2050 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 AC116096.1-201ENST00000566804 2314 ntBASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPH3ALQ9UNE2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC111188.2-201ENST00000529697 1387 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 RNA5SP258-201ENST00000362750 119 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 SNORD66.1-201ENST00000391230 76 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 RNA5SP113-201ENST00000410486 84 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 RN7SKP106-201ENST00000410832 272 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AL136133.1-201ENST00000413694 376 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 BX510359.2-201ENST00000417920 305 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC006548.1-201ENST00000427470 102 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC007559.1-201ENST00000428736 355 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 MTCYBP15-201ENST00000433123 1127 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 RPS7P2-201ENST00000435134 607 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC005154.2-201ENST00000438110 379 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC127537.2-201ENST00000439258 465 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 RPL12P3-201ENST00000440080 396 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC004022.1-201ENST00000447766 1066 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 HMGB3P8-201ENST00000449709 577 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 SLC31A1P1-201ENST00000451221 567 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 HMGB3P22-202ENST00000451823 572 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 HMGN2P16-201ENST00000456802 261 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 snoU13.24-201ENST00000458998 104 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 RN7SL826P-201ENST00000479724 288 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC083982.1-201ENST00000485679 344 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC025554.1-201ENST00000505641 188 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 ATP1B1P1-201ENST00000509767 915 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC110775.1-201ENST00000513721 462 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 NARSP2-201ENST00000518524 679 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 RPL12P22-201ENST00000519073 490 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC093331.1-201ENST00000521474 169 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 MED28P5-201ENST00000528254 438 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC008033.2-201ENST00000542626 177 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AGGF1P6-201ENST00000569213 976 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 BNIP3P32-201ENST00000600015 554 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 XIAPP1-201ENST00000603162 600 ntBASIC3.31□□□□□ -1.88
RPH3ALQ9UNE2 DPRXP5-201ENST00000604662 539 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms