Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC096644.4-201ENST00000563417 2912 ntBASIC4.06□□□□□ -1.76
SCN11AQ9UI33 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 AC009263.1-201ENST00000441193 1239 ntBASIC4.06□□□□□ -1.76
SCN11AQ9UI33 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 SNORA70.19-201ENST00000516717 90 ntBASIC4.06□□□□□ -1.76
SCN11AQ9UI33 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 AC136601.2-201ENST00000604356 474 ntBASIC4.06□□□□□ -1.76
SCN11AQ9UI33 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 LINC00901.1-201ENST00000617252 152 ntBASIC4.06□□□□□ -1.76
SCN11AQ9UI33 AC007998.5-201ENST00000622938 237 ntBASIC4.06□□□□□ -1.76
SCN11AQ9UI33 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 MIR622-201ENST00000638396 96 ntBASIC4.06□□□□□ -1.76
SCN11AQ9UI33 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SCN11AQ9UI33 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SCN11AQ9UI33 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN11AQ9UI33 AC087190.4-201ENST00000574616 8334 ntBASIC4.05□□□□□ -1.76
SCN11AQ9UI33 RN7SKP56-201ENST00000410513 331 ntBASIC4.05□□□□□ -1.76
SCN11AQ9UI33 RNU6-55P-201ENST00000411092 107 ntBASIC4.05□□□□□ -1.76
SCN11AQ9UI33 RNU6-954P-201ENST00000411355 107 ntBASIC4.05□□□□□ -1.76
SCN11AQ9UI33 CST9LP2-201ENST00000437612 320 ntBASIC4.05□□□□□ -1.76
SCN11AQ9UI33 TRBV8-2-201ENST00000475637 270 ntBASIC4.05□□□□□ -1.76
SCN11AQ9UI33 HIGD1AP3-201ENST00000515857 278 ntBASIC4.05□□□□□ -1.76
SCN11AQ9UI33 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN11AQ9UI33 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.05□□□□□ -1.76
SCN11AQ9UI33 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.05□□□□□ -1.76
SCN11AQ9UI33 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN11AQ9UI33 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN11AQ9UI33 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.05□□□□□ -1.76
SCN11AQ9UI33 AC005183.1-201ENST00000603687 1979 ntBASIC4.05□□□□□ -1.76
SCN11AQ9UI33 AL022322.2-201ENST00000624072 20397 ntBASIC4.05□□□□□ -1.76
SCN11AQ9UI33 HSPA8P1-201ENST00000425843 1833 ntBASIC4.04□□□□□ -1.76
SCN11AQ9UI33 AC007899.1-201ENST00000412776 775 ntBASIC4.04□□□□□ -1.76
SCN11AQ9UI33 OR6K4P-201ENST00000423179 955 ntBASIC4.04□□□□□ -1.76
SCN11AQ9UI33 ISCA1P2-201ENST00000438679 421 ntBASIC4.04□□□□□ -1.76
SCN11AQ9UI33 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 AC018552.3-201ENST00000567416 561 ntBASIC4.04□□□□□ -1.76
SCN11AQ9UI33 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.04□□□□□ -1.76
SCN11AQ9UI33 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 AC011503.2-201ENST00000594230 1500 ntBASIC4.04□□□□□ -1.76
SCN11AQ9UI33 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 OR5H2-201ENST00000355273 945 ntBASIC4.04□□□□□ -1.76
SCN11AQ9UI33 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 SUMO2P4-201ENST00000504193 276 ntBASIC4.04□□□□□ -1.76
SCN11AQ9UI33 AC026801.2-201ENST00000515352 425 ntBASIC4.04□□□□□ -1.76
SCN11AQ9UI33 RPL12P22-201ENST00000519073 490 ntBASIC4.04□□□□□ -1.76
SCN11AQ9UI33 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 AL008729.2-201ENST00000606393 473 ntBASIC4.04□□□□□ -1.76
SCN11AQ9UI33 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SCN11AQ9UI33 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SCN11AQ9UI33 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN11AQ9UI33 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN11AQ9UI33 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.03□□□□□ -1.76
SCN11AQ9UI33 GLRXP1-201ENST00000423261 334 ntBASIC4.03□□□□□ -1.76
SCN11AQ9UI33 BX679664.1-201ENST00000434429 253 ntBASIC4.03□□□□□ -1.76
SCN11AQ9UI33 AC087276.1-201ENST00000529659 480 ntBASIC4.03□□□□□ -1.76
SCN11AQ9UI33 AL049844.2-201ENST00000604280 628 ntBASIC4.03□□□□□ -1.76
SCN11AQ9UI33 AC009948.4-201ENST00000604692 675 ntBASIC4.03□□□□□ -1.76
SCN11AQ9UI33 IGHV3-29-201ENST00000604817 344 ntBASIC4.03□□□□□ -1.76
SCN11AQ9UI33 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN11AQ9UI33 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.03□□□□□ -1.76
SCN11AQ9UI33 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN11AQ9UI33 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN11AQ9UI33 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.03□□□□□ -1.76
SCN11AQ9UI33 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SCN11AQ9UI33 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 OR5BR1P-201ENST00000524992 1330 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 RNU6-7-201ENST00000364784 107 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 RNU6-8-201ENST00000365467 107 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 DNAJC19P8-201ENST00000452887 259 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 AL136097.1-201ENST00000456945 913 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 CCDC75P1-201ENST00000469247 791 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 AC117440.1-201ENST00000474107 571 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 AP003122.5-201ENST00000527668 3766 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms