Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AP000620.1-201ENST00000527147 504 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 AC127381.1-201ENST00000555979 939 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 HMGB1P6-201ENST00000569046 646 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 MIR4271-201ENST00000582451 67 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 AC067852.4-201ENST00000590314 478 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 Z84480.1-201ENST00000605131 311 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 FAM27E2-201ENST00000619668 403 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 AC022106.2-201ENST00000620114 757 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 AC073592.6-201ENST00000624271 415 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 AC073593.1-201ENST00000624500 411 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 AL672167.1-205ENST00000641112 3080 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 RBMY1HP-201ENST00000382759 1389 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 AC104966.1-201ENST00000467010 1464 ntBASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
VTI1BQ9UEU0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AC009951.1-201ENST00000623674 2614 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 RN7SKP185-201ENST00000362813 326 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 RNA5SP118-201ENST00000410385 109 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AL138785.1-201ENST00000425821 331 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 PSMA2P3-201ENST00000429685 675 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AL606489.2-201ENST00000433886 234 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AC006335.2-201ENST00000437993 330 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 RPS15AP9-201ENST00000439856 381 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 SNRPGP6-201ENST00000451124 220 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 NANOGP10-201ENST00000453325 895 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AC009963.3-201ENST00000458090 486 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 RNU1-88P-201ENST00000459274 128 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AC006539.1-201ENST00000481419 501 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 SNORA40.12-201ENST00000516329 111 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 CENPUP1-201ENST00000526649 1202 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 HIF1AP1-201ENST00000553642 175 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 COX6CP3-201ENST00000580869 223 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AL355812.1-201ENST00000603215 216 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AL022394.1-201ENST00000606979 292 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AC006329.2-201ENST00000611491 394 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 ZNF680P1-201ENST00000436625 1469 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 AL138713.1-201ENST00000624026 2130 ntBASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VTI1BQ9UEU0 THAP12P4-201ENST00000528321 2266 ntBASIC5.74□□□□□ -1.49
VTI1BQ9UEU0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.74□□□□□ -1.49
VTI1BQ9UEU0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.74□□□□□ -1.49
VTI1BQ9UEU0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTI1BQ9UEU0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTI1BQ9UEU0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTI1BQ9UEU0 Y_RNA.11-201ENST00000362375 109 ntBASIC5.74□□□□□ -1.49
VTI1BQ9UEU0 RNU1-134P-201ENST00000362935 165 ntBASIC5.74□□□□□ -1.49
VTI1BQ9UEU0 RNY3P13-201ENST00000365542 102 ntBASIC5.74□□□□□ -1.49
VTI1BQ9UEU0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VTI1BQ9UEU0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms