Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC004022.2-201ENST00000413824 193 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AL049610.1-201ENST00000423374 372 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 FAR1P1-201ENST00000427163 934 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 EIF2S2P3-201ENST00000428356 999 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AC092641.1-201ENST00000440229 772 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 RPL6P9-201ENST00000466502 859 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 TMED11P-201ENST00000479478 690 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 RPL30P11-201ENST00000495304 339 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 RPL5P23-201ENST00000496040 868 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 RNU2-58P-201ENST00000516403 183 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 PTP4A1P6-201ENST00000531034 478 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 MTND5P21-201ENST00000531961 522 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 MIR3186-201ENST00000577404 85 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AC022146.1-201ENST00000595307 847 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AC105429.2-201ENST00000610567 517 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AC243312.2-201ENST00000623340 601 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AC006065.5-201ENST00000623427 349 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AL034408.1-202ENST00000636088 415 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 AF127577.6-201ENST00000623352 2191 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 CR383658.2-201ENST00000547576 1525 ntBASIC3.24□□□□□ -1.89
VPS29Q9UBQ0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 RNU2-37P-201ENST00000410695 177 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 GLRXP1-201ENST00000423261 334 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AC018644.1-201ENST00000429934 551 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 HSPD1P21-201ENST00000436541 245 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 DDX6P1-205ENST00000441966 1436 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AC245517.2-201ENST00000442890 346 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 RPL21P23-201ENST00000446654 460 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 HMGN2P21-201ENST00000447764 270 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AL133547.1-201ENST00000448546 220 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 BUD31P2-201ENST00000449374 300 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 HMGN1P18-201ENST00000457642 277 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AC025518.1-201ENST00000479856 347 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 RPL21P103-201ENST00000479921 488 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 IGKV2-26-201ENST00000518305 343 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 TRMT10BP1-201ENST00000519377 943 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AC004024.1-201ENST00000549244 247 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AL356321.1-201ENST00000621360 228 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 CR392039.5-201ENST00000623201 510 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 AC244258.1-201ENST00000637553 1071 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 RIOK3P1-201ENST00000418778 1528 ntBASIC3.23□□□□□ -1.89
VPS29Q9UBQ0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 MIR554-201ENST00000384874 96 ntBASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 MIR218-2-201ENST00000385006 110 ntBASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 RNA5SP107-201ENST00000411358 122 ntBASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 AC004987.3-201ENST00000413879 771 ntBASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 BX842559.1-201ENST00000419615 532 ntBASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 RPL31P12-201ENST00000422587 358 ntBASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS29Q9UBQ0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms