Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 SNORD3H-201ENST00000384486 214 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 SOD2P1-201ENST00000396543 562 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 HNRNPDP2-201ENST00000406475 478 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AMD1P2-201ENST00000412936 992 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 SYF2P2-201ENST00000417620 583 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC069157.1-201ENST00000421749 137 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 OR5AW1P-201ENST00000426334 1006 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 SNORA71B-202ENST00000439232 272 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC096992.1-201ENST00000459808 709 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 CYCSP20-201ENST00000473154 315 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 RPS26P15-201ENST00000488067 348 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC112518.2-201ENST00000508565 425 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 HMGN1P11-201ENST00000508668 303 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC026726.1-201ENST00000512859 601 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 RNA5SP208-201ENST00000516156 78 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 C1DP5-201ENST00000525775 383 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC092851.1-201ENST00000535964 478 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 ATP5F1P7-201ENST00000567330 760 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 MTND4LP25-201ENST00000570218 163 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC053481.3-201ENST00000577881 843 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC020914.4-201ENST00000597690 277 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC008739.3-201ENST00000603262 127 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 OR6R2P-201ENST00000609216 300 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 MIR8084-201ENST00000614105 89 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC079684.1-201ENST00000621405 437 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 MTCO1P4-201ENST00000520516 1409 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC119744.1-201ENST00000454746 1715 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 RNU6-1279P-201ENST00000383917 103 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 RNA5SP306-201ENST00000411087 107 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AL035423.1-201ENST00000420331 213 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC087650.1-201ENST00000431445 468 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AL050321.1-201ENST00000432363 400 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC023347.2-201ENST00000433994 462 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 PPIAP17-201ENST00000438507 471 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 MOB1AP2-201ENST00000446060 614 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AL358232.1-201ENST00000448030 501 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC106872.2-201ENST00000494303 480 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC104108.1-201ENST00000509930 412 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 RN7SKP157-201ENST00000516174 282 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 IGHV3-32-201ENST00000519182 355 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AP000916.1-201ENST00000533869 835 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC107016.1-201ENST00000550463 337 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC244505.7-201ENST00000599675 272 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 EIF1P6-201ENST00000600054 334 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AC069304.3-201ENST00000603938 1084 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 AL034408.1-202ENST00000636088 415 ntBASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.34□□□□□ -1.87
CLCF1Q9UBD9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms