Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 MED14P1-201ENST00000430517 648 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AC025164.1-201ENST00000496249 478 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 MTCYBP37-201ENST00000510642 1133 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 SOD1P3-201ENST00000518682 454 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AL109766.1-201ENST00000555080 552 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 MTCYBP28-201ENST00000566728 1132 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 CYCSP40-201ENST00000575927 294 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AC116447.1-201ENST00000613153 453 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AC114781.5-201ENST00000615297 108 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AL158063.1-201ENST00000615349 536 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AC098679.5-201ENST00000624394 571 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 PCMTD1P7-201ENST00000634506 357 ntBASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DNMT3BQ9UBC3 AC091046.3-201ENST00000631455 1574 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 ZNF833P-201ENST00000424938 1494 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 OR5BR1P-201ENST00000524992 1330 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 RNU6-500P-201ENST00000362349 107 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 RNU6-251P-201ENST00000363235 104 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 RNU6-216P-201ENST00000363282 104 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 Y_RNA.126-201ENST00000363382 111 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 RNA5SP515-201ENST00000364570 118 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 MIR506-201ENST00000384998 124 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 MT-TH-201ENST00000387441 69 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 NCSTNP1-201ENST00000406229 144 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC009302.1-201ENST00000417147 390 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC008280.1-201ENST00000418851 412 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 RPL17P36-201ENST00000420302 549 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC099336.2-201ENST00000422457 254 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 CKS1BP6-201ENST00000424932 240 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 RPP40P1-201ENST00000426762 456 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 RPS29P17-201ENST00000430795 166 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC010153.1-201ENST00000432862 727 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AL360221.1-201ENST00000445989 335 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 MTCO2P18-201ENST00000457151 658 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC099560.2-201ENST00000457554 255 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 CYCSP34-201ENST00000458172 304 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC013828.1-201ENST00000481845 158 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 HMGB3P16-201ENST00000508037 287 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 MTCO3P7-201ENST00000510008 774 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC015795.1-201ENST00000513669 327 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 NPM1P6-201ENST00000521088 871 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AP000827.1-201ENST00000527814 258 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 WISP1-OT1-201ENST00000602893 642 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC064872.1-201ENST00000604823 1072 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 AC125257.1-201ENST00000560400 2930 ntBASIC4.82□□□□□ -1.64
DNMT3BQ9UBC3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DNMT3BQ9UBC3 AC009951.1-201ENST00000623674 2614 ntBASIC4.81□□□□□ -1.64
DNMT3BQ9UBC3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
DNMT3BQ9UBC3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DNMT3BQ9UBC3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
DNMT3BQ9UBC3 ZNF37BP-203ENST00000452306 1352 ntBASIC4.81□□□□□ -1.64
DNMT3BQ9UBC3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DNMT3BQ9UBC3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.81□□□□□ -1.64
DNMT3BQ9UBC3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.81□□□□□ -1.64
DNMT3BQ9UBC3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms