Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL049873.1-201ENST00000480540 376 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 RPL21P13-201ENST00000488305 481 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC023141.12-201ENST00000512399 199 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 SNORA70.24-201ENST00000517233 118 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 MTND2P17-201ENST00000550281 688 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 CBX3P5-201ENST00000552017 521 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC073657.2-201ENST00000605661 303 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AF117829.1-206ENST00000621883 3802 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AP003072.5-201ENST00000623872 773 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC007496.3-201ENST00000624987 3443 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC091390.3-201ENST00000426478 338 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC000041.1-201ENST00000439655 175 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC020893.1-201ENST00000502452 580 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC112198.1-201ENST00000505369 1220 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 PHBP14-201ENST00000512887 367 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC087888.1-201ENST00000550884 1254 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AP000919.1-202ENST00000581139 1264 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 AC019080.5-201ENST00000624891 757 ntBASIC3.14□□□□□ -1.91
CCDC88CQ9P219 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC88CQ9P219 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC88CQ9P219 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC88CQ9P219 RANP4-201ENST00000413361 655 ntBASIC3.13□□□□□ -1.91
CCDC88CQ9P219 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC88CQ9P219 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC88CQ9P219 AC005326.1-201ENST00000429197 123 ntBASIC3.13□□□□□ -1.91
CCDC88CQ9P219 AC011242.1-201ENST00000433596 1158 ntBASIC3.13□□□□□ -1.91
CCDC88CQ9P219 RPL37P4-201ENST00000448908 268 ntBASIC3.13□□□□□ -1.91
CCDC88CQ9P219 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
CCDC88CQ9P219 AL136126.1-201ENST00000473603 402 ntBASIC3.13□□□□□ -1.91
CCDC88CQ9P219 AC068305.1-201ENST00000497406 726 ntBASIC3.13□□□□□ -1.91
CCDC88CQ9P219 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC88CQ9P219 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC88CQ9P219 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC88CQ9P219 MTND2P13-201ENST00000577438 1039 ntBASIC3.13□□□□□ -1.91
CCDC88CQ9P219 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC88CQ9P219 AC079880.2-201ENST00000603790 1213 ntBASIC3.13□□□□□ -1.91
CCDC88CQ9P219 AC015849.6-201ENST00000605454 474 ntBASIC3.13□□□□□ -1.91
CCDC88CQ9P219 AC084036.1-201ENST00000609190 508 ntBASIC3.13□□□□□ -1.91
CCDC88CQ9P219 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC88CQ9P219 AC110801.1-201ENST00000623590 212 ntBASIC3.13□□□□□ -1.91
CCDC88CQ9P219 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC066616.2-201ENST00000559334 1481 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 LIPT1P1-201ENST00000415870 1186 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 ETF1P3-201ENST00000430422 1160 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 RNU7-170P-201ENST00000459303 61 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 RPS4XP22-201ENST00000480755 780 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 MIR5004-201ENST00000579078 107 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AL356321.1-201ENST00000621360 228 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 EXOC5P1-201ENST00000510543 1969 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC007529.1-201ENST00000418574 2178 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 RNU6-283P-201ENST00000364788 107 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 MIR184-201ENST00000384962 84 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AL583834.1-201ENST00000406943 343 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 RN7SL863P-201ENST00000462370 296 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC017015.1-201ENST00000477387 286 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms