Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 HMGB3P30-201ENST00000457863 606 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 PPIAP15-201ENST00000479662 484 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 RPL21P47-201ENST00000483696 477 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 RPL5P23-201ENST00000496040 868 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 RN7SKP157-201ENST00000516174 282 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 RN7SKP283-201ENST00000517197 270 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 AP000916.1-201ENST00000533869 835 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 ZNF285B-201ENST00000561698 1767 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 NTAN1P1-201ENST00000603150 646 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 AC069200.1-201ENST00000609511 323 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 MIR7702-201ENST00000621931 59 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 AL359715.5-201ENST00000623431 443 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 ZNF962P-201ENST00000443465 3140 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 MTCO1P4-201ENST00000520516 1409 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 DCAF13P1-201ENST00000495256 1330 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 SNORA63.1-201ENST00000362493 131 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 RNA5SP167-201ENST00000365461 116 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 RNU6-481P-201ENST00000384194 107 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AC092745.2-202ENST00000411880 369 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AC008173.1-201ENST00000418901 264 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 Z97055.1-201ENST00000419730 712 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AL391219.1-201ENST00000422570 483 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 UBE2D3P3-201ENST00000426992 425 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 OR4F13P-201ENST00000428478 931 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 HMGB3P22-202ENST00000451823 572 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 CEACAMP4-201ENST00000457676 421 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 SETP6-201ENST00000479329 568 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 RPS3AP6-201ENST00000484430 795 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AC008494.2-201ENST00000514544 370 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 RNU6-467P-201ENST00000517027 110 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 C1DP5-201ENST00000525775 383 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AC079171.1-201ENST00000568788 914 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AC007687.1-201ENST00000602704 304 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 LLPHP1-201ENST00000603571 367 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 VN1R9P-201ENST00000614184 867 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 AC073530.2-201ENST00000623987 261 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.07□□□□□ -1.76
HPS4Q9NQG7 SEC63P2-201ENST00000503863 1939 ntBASIC4.07□□□□□ -1.76
HPS4Q9NQG7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 AC104446.1-201ENST00000613728 1321 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 RNA5SP119-201ENST00000362715 117 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 SNORD46.1-201ENST00000364139 104 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 AC092809.1-201ENST00000441469 474 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 RPL7P15-201ENST00000461190 712 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 AC078817.1-201ENST00000492623 435 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 OR5H3P-201ENST00000502817 919 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 MTCO2P9-201ENST00000503214 694 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 AC025554.1-201ENST00000505641 188 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 MTATP6P22-201ENST00000507369 598 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 AC121161.1-201ENST00000510606 652 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.06□□□□□ -1.76
HPS4Q9NQG7 RNU1-95P-201ENST00000516357 160 ntBASIC4.06□□□□□ -1.76
HPS4Q9NQG7 RNU1-128P-201ENST00000516704 160 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms