Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL139098.1-201ENST00000407291 389 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 RNU6-603P-201ENST00000411403 107 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC068533.2-201ENST00000411872 306 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC069213.2-201ENST00000420238 366 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 NPM1P24-201ENST00000428039 894 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC244035.1-201ENST00000430042 390 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC096638.2-201ENST00000434965 711 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC129850.1-201ENST00000436203 508 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 RAB11AP1-201ENST00000442978 646 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AL360221.1-201ENST00000445989 335 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AL162591.2-201ENST00000449634 317 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 SCARNA10-201ENST00000459255 330 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 MTND1P16-201ENST00000465177 898 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 SETP11-201ENST00000473027 690 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 UBA52P3-201ENST00000491303 382 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 STMN1P2-201ENST00000508435 439 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 MTND4LP31-201ENST00000514859 294 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 RNU2-30P-201ENST00000516209 141 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 CYCSP28-201ENST00000534284 321 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AL110118.1-201ENST00000553543 400 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 RPL7P50-201ENST00000600588 727 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC133552.5-201ENST00000604266 540 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC064872.1-201ENST00000604823 1072 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC112220.3-201ENST00000605502 502 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC092653.1-201ENST00000608509 531 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC008083.4-201ENST00000615076 444 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AL136981.2-201ENST00000617319 734 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 MKKS-204ENST00000639674 192 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AL451142.2-201ENST00000429076 2090 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 OR14L1P-202ENST00000641545 3009 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 RNU1-20P-201ENST00000363314 162 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 RNU6-1066P-201ENST00000363573 105 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 RNU6-1151P-201ENST00000384684 107 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 RNU2-65P-201ENST00000410162 185 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 RN7SKP267-201ENST00000410381 285 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 PIGPP2-201ENST00000411569 458 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 VDAC1P9-201ENST00000412766 841 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AL450992.3-201ENST00000413192 568 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC009237.10-201ENST00000414112 510 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 SKP1P3-201ENST00000429280 487 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 TMX2P1-201ENST00000436507 708 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 RPL7L1P1-201ENST00000448259 785 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 VN1R32P-201ENST00000452234 905 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 MTCO3P16-201ENST00000454456 754 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 NCOR1P1-202ENST00000486162 291 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 RPS6P4-201ENST00000494693 758 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms