Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 RPL7L1P13-201ENST00000511702 739 ntBASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 MTND2P31-201ENST00000512602 616 ntBASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 AL450270.1-201ENST00000606160 391 ntBASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 OR2BH1P-201ENST00000608850 864 ntBASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 AC024595.1-201ENST00000623088 387 ntBASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 AC119744.1-201ENST00000454746 1715 ntBASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.15□□□□□ -1.75
CCSER1Q9C0I3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 RPL7P60-201ENST00000397636 735 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AL391417.1-201ENST00000404100 426 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 PRELID3BP11-201ENST00000414230 479 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AC005189.1-201ENST00000431286 310 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 MTCO3P43-201ENST00000440974 771 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 HMGB1P48-201ENST00000446155 598 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 PPIAP3-201ENST00000450588 505 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 RN7SL542P-201ENST00000467147 294 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AC106872.2-201ENST00000494303 480 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 SAP18P1-201ENST00000512058 390 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 RN7SKP96-201ENST00000516948 297 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 SNORA76.2-201ENST00000517095 137 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 IGKV2D-23-201ENST00000518179 286 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AC007991.1-201ENST00000522680 631 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AC087272.1-201ENST00000523624 533 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 MED28P5-201ENST00000528254 438 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 CENPUP2-201ENST00000555897 1186 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AC099489.2-201ENST00000574976 260 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AL161637.1-201ENST00000622380 412 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AP000553.6-201ENST00000641242 118 ntBASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.14□□□□□ -1.75
CCSER1Q9C0I3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 OR4A15-201ENST00000314706 1035 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 AC092745.2-202ENST00000411880 369 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 NOTCH2P1-201ENST00000443481 624 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 AC068135.1-201ENST00000446164 246 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 MTCO3P16-201ENST00000454456 754 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 RPL23AP73-201ENST00000492507 471 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 MTND4LP31-201ENST00000514859 294 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 C1DP5-201ENST00000525775 383 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 AC141257.3-201ENST00000572906 215 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 AC079880.2-201ENST00000603790 1213 ntBASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.13□□□□□ -1.75
CCSER1Q9C0I3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms