Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CYCSP33-201ENST00000414485 327 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AL353621.1-201ENST00000418219 243 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 NIP7P1-201ENST00000433227 512 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 USP9YP7-201ENST00000436723 430 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 CLUHP5-201ENST00000438421 774 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 PRDX3P3-201ENST00000447765 522 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 RPS11P1-201ENST00000451072 473 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 USP9YP32-201ENST00000452432 430 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 RN7SL414P-201ENST00000469545 294 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 RN7SL259P-201ENST00000478499 253 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 RN7SL241P-201ENST00000482973 236 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC022133.1-201ENST00000490961 571 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AP006245.1-201ENST00000522549 120 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC027288.2-201ENST00000553028 243 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 MIR3135A-201ENST00000578460 77 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC093063.1-201ENST00000599317 363 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC009314.1-201ENST00000603871 304 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AL021918.1-201ENST00000603933 236 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AL513218.1-201ENST00000606527 391 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 MIR8076-201ENST00000611401 83 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 FLII-230ENST00000628188 156 ntTSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 SAMMSON-203ENST00000641005 2168 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AC005332.9-201ENST00000620266 2921 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 LINC02035-201ENST00000610128 5476 ntBASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
KRTAP3-1Q9BYR8 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 SMG1P7-201ENST00000565246 2704 ntBASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 AC090740.1-201ENST00000623193 2262 ntBASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 AC114947.2-201ENST00000565748 2125 ntBASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 CLCA3P-203ENST00000490028 2781 ntBASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 AC104837.1-201ENST00000444644 1587 ntBASIC3.65□□□□□ -1.82
KRTAP3-1Q9BYR8 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SKP107-201ENST00000364157 290 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 Y_RNA.233-201ENST00000364407 101 ntBASIC3.65□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SKP76-201ENST00000364419 323 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms