Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 SNORA7.2-201ENST00000364446 145 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 RNA5SP22-201ENST00000365393 109 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 RNU6-224P-201ENST00000384055 107 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 Y_RNA.493-201ENST00000384422 102 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 MTCO1P56-201ENST00000401674 224 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 ARL4AP5-201ENST00000404372 599 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 HSPE1P26-201ENST00000405341 275 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 MTCO3P31-201ENST00000405526 789 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 RNU4-78P-201ENST00000410940 126 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 C1DP1-201ENST00000426049 402 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 AC096632.1-201ENST00000427395 310 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 RPL23AP1-201ENST00000428990 471 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.72□□□□□ -1.81
SSX3Q99909 GSTA7P-201ENST00000438425 448 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.72□□□□□ -1.81
SSX3Q99909 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 AC108463.1-201ENST00000450258 347 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX3Q99909 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX3Q99909 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX3Q99909 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX3Q99909 AC096571.1-202ENST00000506634 735 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX3Q99909 PARP4P3-201ENST00000510265 317 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 NDUFB4P9-201ENST00000511646 388 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 KCTD9P2-201ENST00000512203 1013 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 RNA5SP135-201ENST00000517019 125 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 AC091163.3-201ENST00000518269 1144 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX3Q99909 AC021451.1-201ENST00000523498 1129 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX3Q99909 DEFB130C-202ENST00000530001 230 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX3Q99909 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.72□□□□□ -1.81
SSX3Q99909 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX3Q99909 AGGF1P6-201ENST00000569213 976 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SSX3Q99909 MIR4284-201ENST00000578924 81 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 MIR4715-201ENST00000584117 79 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX3Q99909 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX3Q99909 AC025588.3-201ENST00000604182 274 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 AP003973.1-201ENST00000604639 691 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX3Q99909 MIR6798-201ENST00000612887 67 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 AC087821.2-201ENST00000637086 450 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 ZNF663P-202ENST00000641770 1131 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 USP8P1-201ENST00000494673 3183 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 MTND5P31-201ENST00000419366 1374 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SSX3Q99909 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX3Q99909 AL592148.3-201ENST00000608771 2646 ntBASIC3.72□□□□□ -1.81
SSX3Q99909 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX3Q99909 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.81
SSX3Q99909 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SSX3Q99909 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.71□□□□□ -1.81
SSX3Q99909 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.71□□□□□ -1.82
SSX3Q99909 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSX3Q99909 HMGB1P5-201ENST00000255320 642 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSX3Q99909 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSX3Q99909 MIR129-1-201ENST00000384972 72 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AL121972.1-201ENST00000402023 252 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AL139098.1-201ENST00000407291 389 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 VN1R51P-201ENST00000411675 945 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 OR51B3P-201ENST00000412287 913 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 PTP4A1P5-201ENST00000420305 455 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AL159169.1-201ENST00000421119 127 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC009237.2-201ENST00000421358 284 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX3Q99909 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX3Q99909 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.71□□□□□ -1.82
SSX3Q99909 ELOCP18-201ENST00000434209 337 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.71□□□□□ -1.82
SSX3Q99909 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.71□□□□□ -1.82
SSX3Q99909 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX3Q99909 NDUFA5P7-201ENST00000452914 242 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX3Q99909 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX3Q99909 CEACAMP4-201ENST00000457676 421 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC010307.1-201ENST00000467206 836 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX3Q99909 SNRPGP3-201ENST00000469405 227 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX3Q99909 PPIAP15-201ENST00000479662 484 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX3Q99909 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SSX3Q99909 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX3Q99909 DYNLL1P6-201ENST00000503440 264 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms