Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 MTND4P16-201ENST00000466108 1367 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 RNA5SP305-201ENST00000362665 119 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 RN7SKP226-201ENST00000364912 300 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 RNU6-723P-201ENST00000383973 107 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 RNU6-1151P-201ENST00000384684 107 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 RN7SKP126-201ENST00000411143 300 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 Z97055.1-201ENST00000419730 712 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AL389915.1-201ENST00000422463 466 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 REREP1Y-201ENST00000422655 198 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AC093655.2-201ENST00000425735 631 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 USP9YP18-201ENST00000425912 695 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 MTCO2P19-201ENST00000427513 598 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 MTND3P21-201ENST00000433774 331 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 REREP2Y-201ENST00000439103 200 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 CBX1P4-201ENST00000439415 457 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 PAXBP1P1-201ENST00000449315 447 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 NPM1P39-201ENST00000449818 867 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 NF1P3-201ENST00000457709 450 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AC023424.2-201ENST00000493479 777 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AP002373.2-201ENST00000541631 1060 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 SLC25A36P1-201ENST00000590111 465 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 SEPT7P9-203ENST00000604116 343 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AC011451.2-201ENST00000604303 598 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 AC098614.4-201ENST00000607601 462 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 MIR7641-1-201ENST00000627518 61 ntBASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHAMP1Q96JM3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AL031595.2-201ENST00000624215 19071 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 SMG1P4-204ENST00000523028 4131 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 CR848007.1-201ENST00000442354 1699 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 Y_RNA.25-201ENST00000362528 102 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 RNU1-83P-201ENST00000363426 164 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 RN7SKP113-201ENST00000363891 295 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 Y_RNA.303-201ENST00000364998 94 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 HMGB3P7-201ENST00000400214 611 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 ARL4AP5-201ENST00000404372 599 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 BTF3P7-201ENST00000407097 488 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AC093162.1-201ENST00000419682 124 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 CYP4F29P-201ENST00000420685 446 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AL953862.1-201ENST00000423016 168 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 DYNLL1P7-201ENST00000429273 258 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 OR52B5P-201ENST00000435337 951 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 RPL26P28-201ENST00000451325 435 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AC098824.1-201ENST00000453565 980 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 RPS29P33-201ENST00000456717 146 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 RPL7AP52-201ENST00000458096 790 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 RN7SL222P-201ENST00000476452 299 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 MTCYBP17-201ENST00000503579 789 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 RNU6-718P-201ENST00000516166 105 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 RNA5SP43-201ENST00000516559 110 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AP002748.2-201ENST00000528671 348 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 CYCSP2-201ENST00000558168 301 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AC093519.1-201ENST00000566109 298 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AC091135.1-201ENST00000585943 307 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AL022154.1-201ENST00000604698 785 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms