Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TOPBP1Q92547 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TOPBP1Q92547 OR1S2-201ENST00000302592 978 ntBASIC5.17□□□□□ -1.58
TOPBP1Q92547 OR56A5-201ENST00000340110 738 ntBASIC5.17□□□□□ -1.58
TOPBP1Q92547 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.17□□□□□ -1.58
TOPBP1Q92547 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TOPBP1Q92547 RNA5SP104-201ENST00000410989 118 ntBASIC5.17□□□□□ -1.58
TOPBP1Q92547 DPPA2P2-201ENST00000418220 897 ntBASIC5.17□□□□□ -1.58
TOPBP1Q92547 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.17□□□□□ -1.58
TOPBP1Q92547 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
TOPBP1Q92547 AC034159.1-201ENST00000513885 583 ntBASIC5.17□□□□□ -1.58
TOPBP1Q92547 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.17□□□□□ -1.58
TOPBP1Q92547 AL139395.1-201ENST00000603662 160 ntBASIC5.17□□□□□ -1.58
TOPBP1Q92547 AC087241.4-201ENST00000612441 480 ntBASIC5.17□□□□□ -1.58
TOPBP1Q92547 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TOPBP1Q92547 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.16□□□□□ -1.58
TOPBP1Q92547 RNU6-316P-201ENST00000391027 107 ntBASIC5.16□□□□□ -1.58
TOPBP1Q92547 AL136116.1-201ENST00000403591 381 ntBASIC5.16□□□□□ -1.58
TOPBP1Q92547 RPL7P25-201ENST00000404151 721 ntBASIC5.16□□□□□ -1.58
TOPBP1Q92547 BMS1P22-201ENST00000414726 313 ntBASIC5.16□□□□□ -1.58
TOPBP1Q92547 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.16□□□□□ -1.58
TOPBP1Q92547 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.16□□□□□ -1.58
TOPBP1Q92547 RPS4XP22-201ENST00000480755 780 ntBASIC5.16□□□□□ -1.58
TOPBP1Q92547 RPL7P47-201ENST00000497299 556 ntBASIC5.16□□□□□ -1.58
TOPBP1Q92547 AC083906.5-201ENST00000503722 328 ntBASIC5.16□□□□□ -1.58
TOPBP1Q92547 YWHAEP4-201ENST00000505390 198 ntBASIC5.16□□□□□ -1.58
TOPBP1Q92547 SETP12-201ENST00000514068 805 ntBASIC5.16□□□□□ -1.58
TOPBP1Q92547 MIR4435-1-201ENST00000582552 80 ntBASIC5.16□□□□□ -1.58
TOPBP1Q92547 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TOPBP1Q92547 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TOPBP1Q92547 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TOPBP1Q92547 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
TOPBP1Q92547 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
TOPBP1Q92547 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TOPBP1Q92547 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TOPBP1Q92547 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
TOPBP1Q92547 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TOPBP1Q92547 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TOPBP1Q92547 OR13C3-201ENST00000374781 1108 ntBASIC5.15□□□□□ -1.58
TOPBP1Q92547 SNORD15B-201ENST00000384714 146 ntBASIC5.15□□□□□ -1.58
TOPBP1Q92547 AC002075.2-201ENST00000425207 252 ntBASIC5.15□□□□□ -1.58
TOPBP1Q92547 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.15□□□□□ -1.58
TOPBP1Q92547 AC099560.2-201ENST00000457554 255 ntBASIC5.15□□□□□ -1.58
TOPBP1Q92547 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.15□□□□□ -1.58
TOPBP1Q92547 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.15□□□□□ -1.58
TOPBP1Q92547 BDH2P1-201ENST00000602288 736 ntBASIC5.15□□□□□ -1.58
TOPBP1Q92547 BNIP3P10-201ENST00000605360 577 ntBASIC5.15□□□□□ -1.58
TOPBP1Q92547 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
TOPBP1Q92547 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.15□□□□□ -1.59
TOPBP1Q92547 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
TOPBP1Q92547 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.15□□□□□ -1.59
TOPBP1Q92547 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TOPBP1Q92547 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TOPBP1Q92547 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.14□□□□□ -1.59
TOPBP1Q92547 NANOGP6-201ENST00000429190 847 ntBASIC5.14□□□□□ -1.59
TOPBP1Q92547 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.14□□□□□ -1.59
TOPBP1Q92547 Z99127.3-201ENST00000448158 395 ntBASIC5.14□□□□□ -1.59
TOPBP1Q92547 RPL5P30-201ENST00000465511 891 ntBASIC5.14□□□□□ -1.59
TOPBP1Q92547 AC022795.1-201ENST00000473808 480 ntBASIC5.14□□□□□ -1.59
TOPBP1Q92547 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.14□□□□□ -1.59
TOPBP1Q92547 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.14□□□□□ -1.59
TOPBP1Q92547 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TOPBP1Q92547 AC018552.3-201ENST00000567416 561 ntBASIC5.14□□□□□ -1.59
TOPBP1Q92547 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TOPBP1Q92547 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TOPBP1Q92547 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TOPBP1Q92547 AC018555.1-201ENST00000567548 1980 ntBASIC5.14□□□□□ -1.59
TOPBP1Q92547 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TOPBP1Q92547 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TOPBP1Q92547 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TOPBP1Q92547 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.14□□□□□ -1.59
TOPBP1Q92547 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
TOPBP1Q92547 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.13□□□□□ -1.59
TOPBP1Q92547 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.13□□□□□ -1.59
TOPBP1Q92547 AL513174.1-201ENST00000423182 629 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.13□□□□□ -1.59
TOPBP1Q92547 TRBV8-2-201ENST00000475637 270 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 AC114781.4-201ENST00000513707 639 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 RNU4-29P-201ENST00000515943 174 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 RNU6-237P-201ENST00000515985 71 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.13□□□□□ -1.59
TOPBP1Q92547 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.13□□□□□ -1.59
TOPBP1Q92547 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.13□□□□□ -1.59
TOPBP1Q92547 AC004832.5-201ENST00000608677 401 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TOPBP1Q92547 AC243829.7-201ENST00000633081 225 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 AL365361.1-201ENST00000566942 3481 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 AC021755.1-201ENST00000559747 1447 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 AL049780.3-201ENST00000624612 1583 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 RPS24P12-201ENST00000402084 394 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC5.13□□□□□ -1.59
TOPBP1Q92547 Y_RNA.638-201ENST00000459374 113 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 AC017037.2-201ENST00000513850 890 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.13□□□□□ -1.59
TOPBP1Q92547 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TOPBP1Q92547 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TOPBP1Q92547 AC024153.1-201ENST00000603103 365 ntBASIC5.13□□□□□ -1.59
TOPBP1Q92547 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TOPBP1Q92547 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TOPBP1Q92547 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms