Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHKBP1Q8TBC3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHKBP1Q8TBC3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SHKBP1Q8TBC3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SHKBP1Q8TBC3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SHKBP1Q8TBC3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHKBP1Q8TBC3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SHKBP1Q8TBC3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHKBP1Q8TBC3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
SHKBP1Q8TBC3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
SHKBP1Q8TBC3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AC140479.2-201ENST00000421567 3130 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 PWAR1-201ENST00000624188 2414 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 DNM1P47-203ENST00000571780 12667 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AC067945.1-201ENST00000342609 618 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 Y_RNA.25-201ENST00000362528 102 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 RNU6-223P-201ENST00000362830 107 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 SNORA70-201ENST00000384436 135 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 RNU4-70P-201ENST00000384579 139 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AC114482.1-201ENST00000418010 247 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AL139148.1-201ENST00000427122 680 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 CYCSP6-201ENST00000434498 302 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 GAPDHP58-201ENST00000438477 1006 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 LSM1P1-201ENST00000438629 273 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 RNU6-329P-201ENST00000459618 107 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 SNRPCP3-201ENST00000474888 476 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AC138409.2-202ENST00000507274 458 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 PGAM1P13-201ENST00000507497 754 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 PCBP2P3-201ENST00000509726 843 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 MTCO2P24-201ENST00000515611 426 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 OR10G5P-201ENST00000532733 358 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 BCRP9-201ENST00000605312 388 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AP004247.3-201ENST00000608682 624 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AC000068.2-201ENST00000608816 460 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AC093913.1-201ENST00000614178 329 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AC025574.2-201ENST00000615621 514 ntBASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHKBP1Q8TBC3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 Y_RNA.31-201ENST00000362574 102 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 SNORD116-29-201ENST00000384516 83 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 SNORD116-23-201ENST00000384645 92 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 RNU6-1158P-201ENST00000391167 107 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 MIR937-201ENST00000401271 86 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 TMSB4XP8-201ENST00000402089 135 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 RN7SKP17-201ENST00000411242 351 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 TMSB4XP6-201ENST00000415187 135 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 TMSB4XP1-201ENST00000424567 135 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 RPEP2-201ENST00000432149 701 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AC023347.2-201ENST00000433994 462 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 MEMO1P3-201ENST00000459811 302 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 RN7SL172P-201ENST00000460535 303 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 RN7SL610P-201ENST00000463845 291 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 MTND4P17-201ENST00000470444 350 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AL135752.1-201ENST00000479477 471 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AC093270.2-201ENST00000486157 792 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms