Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SNIP1Q8TAD8 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNIP1Q8TAD8 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SNIP1Q8TAD8 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SNIP1Q8TAD8 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.37□□□□□ -1.39
SNIP1Q8TAD8 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNIP1Q8TAD8 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.37□□□□□ -1.39
SNIP1Q8TAD8 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNIP1Q8TAD8 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNIP1Q8TAD8 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.37□□□□□ -1.39
SNIP1Q8TAD8 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC110716.2-201ENST00000563865 3945 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC092111.1-201ENST00000618256 3358 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 Y_RNA.54-201ENST00000362766 105 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 RNU4-42P-201ENST00000364738 142 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 RNU6-317P-201ENST00000384031 107 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 MIR640-201ENST00000385086 96 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 U3.20-201ENST00000390909 217 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC004386.1-201ENST00000393214 761 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AL603910.2-201ENST00000407268 136 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 MIR1298-201ENST00000408783 112 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 RN7SKP229-201ENST00000410465 302 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 RNU2-51P-201ENST00000410708 197 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC244452.1-201ENST00000413798 141 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 RPL21P38-201ENST00000418090 167 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 RPL23AP15-201ENST00000450202 459 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 OR2AQ1P-201ENST00000451972 200 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AP000893.1-201ENST00000474462 794 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 RN7SL809P-201ENST00000482040 297 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 RN7SKP82-201ENST00000516786 223 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 MIR3135A-201ENST00000578460 77 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC024619.4-201ENST00000580924 316 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC073410.2-201ENST00000603240 332 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 HMGN2P28-201ENST00000606102 262 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AL161423.1-201ENST00000613700 262 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 AC009313.2-201ENST00000417893 1941 ntBASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNIP1Q8TAD8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 AC241584.2-201ENST00000637142 2090 ntBASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 AL589993.1-201ENST00000407450 2524 ntBASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 Y_RNA.83-201ENST00000363005 113 ntBASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 Y_RNA.105-201ENST00000363182 111 ntBASIC6.35□□□□□ -1.39
SNIP1Q8TAD8 RNU6-511P-201ENST00000363496 107 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms