Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC093227.2-201ENST00000589357 285 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AP003117.1-201ENST00000602771 554 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC006254.3-201ENST00000603353 884 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC022387.2-201ENST00000604050 448 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC018754.1-201ENST00000607486 925 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC121761.2-201ENST00000617300 689 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC007342.8-201ENST00000623278 678 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 RNA5SP51-201ENST00000364750 119 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AL049610.1-201ENST00000423374 372 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 Z99127.2-201ENST00000441426 334 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AL627224.1-201ENST00000448334 444 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 HMGB1P26-201ENST00000452520 628 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 RNU6-775P-201ENST00000459318 96 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 RN7SKP60-201ENST00000516985 239 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AC104997.1-201ENST00000519761 717 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 OR5D17P-201ENST00000531492 978 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 TGIF1P1-201ENST00000558095 802 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AC119674.1-207ENST00000641355 633 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AC091152.2-201ENST00000591628 2569 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 ZNF33CP-201ENST00000432492 2030 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 AC007823.1-201ENST00000569932 1566 ntBASIC3.63□□□□□ -1.83
CDKL3Q8IVW4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 SNORD9-201ENST00000362566 104 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 RNA5SP189-201ENST00000364920 115 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 SNORD3H-201ENST00000384486 214 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 AC004987.3-201ENST00000413879 771 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 MTCYBP31-201ENST00000438855 1122 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 AL357552.1-201ENST00000445254 415 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 AC239367.2-201ENST00000447309 705 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 AP000563.1-201ENST00000490865 758 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 AC078918.1-201ENST00000498515 228 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 RNU6-1004P-201ENST00000516584 111 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 SNORA70.19-201ENST00000516717 90 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 MIR1254-2-201ENST00000579553 63 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 AL592295.2-201ENST00000612578 206 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 CR392039.4-201ENST00000624968 501 ntBASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDKL3Q8IVW4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AL353743.4-201ENST00000422653 1547 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 FRG1CP-201ENST00000358464 769 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 RNU1-64P-201ENST00000365443 163 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 MIR184-201ENST00000384962 84 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 RNU6-244P-201ENST00000391028 104 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AL590704.1-201ENST00000402856 794 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 HMGB3P18-201ENST00000406327 590 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AL035423.1-201ENST00000420331 213 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AC122718.1-201ENST00000439448 744 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms