Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF39Q86UA1 MAPK10-253ENST00000641010 4072 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AL158163.1-201ENST00000603915 1649 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 RNA5SP175-201ENST00000364275 119 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 RNA5SP239-201ENST00000410218 129 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 C1DP1-201ENST00000426049 402 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 DPRXP1-201ENST00000426312 460 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 HSFY7P-201ENST00000432672 318 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 ELOCP18-201ENST00000434209 337 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 HSFY8P-201ENST00000437934 318 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 HMGB1P16-201ENST00000447155 540 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 HSFY5P-201ENST00000453726 309 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 RPL35P6-201ENST00000490024 372 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC108475.1-201ENST00000507880 950 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 OR4R3P-201ENST00000525084 838 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 OR5M7P-201ENST00000526140 972 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC025884.1-201ENST00000556034 378 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 MIR432-201ENST00000606207 94 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AL391834.2-201ENST00000609982 546 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC084824.4-201ENST00000620106 731 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC099654.9-201ENST00000637055 678 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 AC000367.1-201ENST00000452711 1766 ntBASIC4.37□□□□□ -1.71
PRPF39Q86UA1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
PRPF39Q86UA1 PABPC1P7-201ENST00000413177 1513 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AL356489.2-201ENST00000566968 3528 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 RN7SKP44-201ENST00000363602 316 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 RNA5SP39-201ENST00000411245 120 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 RPL31P2-201ENST00000413849 377 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AL157831.1-201ENST00000426134 473 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 MTCO1P3-201ENST00000429327 192 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 RPS7P7-201ENST00000463499 571 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AC010301.1-201ENST00000473936 355 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AC041039.1-201ENST00000485656 536 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AC104164.2-201ENST00000496953 495 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 PRELID3BP7-201ENST00000503606 469 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 PRELID3BP6-201ENST00000503839 571 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AC093752.1-206ENST00000511823 336 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 HNRNPKP5-201ENST00000515300 253 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 RNU4-60P-201ENST00000517239 135 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 TVP23BP1-201ENST00000557500 617 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AL445363.3-201ENST00000623080 671 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 AC008013.2-202ENST00000637965 364 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 SEPT7P7-201ENST00000420492 1301 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms