Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
LYSMD3Q7Z3D4 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LYSMD3Q7Z3D4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.3□□□□□ -1.4
LYSMD3Q7Z3D4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.3□□□□□ -1.4
LYSMD3Q7Z3D4 AC011416.1-201ENST00000514947 1732 ntBASIC6.3□□□□□ -1.4
LYSMD3Q7Z3D4 AC110373.1-201ENST00000505994 3505 ntBASIC6.3□□□□□ -1.4
LYSMD3Q7Z3D4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC005592.1-201ENST00000566527 1640 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC003973.3-201ENST00000624863 2822 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 RNA5SP346-201ENST00000363541 121 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 RNU6-33P-201ENST00000384793 107 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 MIR188-201ENST00000385034 86 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 UBE2V1P2-201ENST00000397758 440 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 Z93019.1-201ENST00000416450 973 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC093156.1-201ENST00000440382 670 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 HSFY6P-201ENST00000445573 403 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC055855.1-201ENST00000489563 579 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 RPL23AP72-201ENST00000492447 435 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC112484.3-201ENST00000505910 329 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 KHDC1P1-201ENST00000511053 508 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 ZNF519P4-201ENST00000514008 125 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 RNU2-53P-201ENST00000516257 147 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC011853.1-201ENST00000518911 454 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 MTND4P7-201ENST00000523876 130 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC023043.2-201ENST00000589678 1026 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AL499605.1-201ENST00000604628 403 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 CDRT1-208ENST00000630868 794 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 AC111152.1-202ENST00000635848 339 ntBASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD3Q7Z3D4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AC007114.2-201ENST00000576014 4281 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AL161781.1-201ENST00000354277 403 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 RNU6-266P-201ENST00000364225 107 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 RNU6-1029P-201ENST00000384109 107 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 ARF4P3-201ENST00000397387 509 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AL356421.1-201ENST00000403255 413 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 MIR1282-201ENST00000408865 101 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AL591848.1-201ENST00000413092 322 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AC007568.1-201ENST00000422912 471 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 GAPDHP59-201ENST00000435908 267 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 RANP2-201ENST00000456833 229 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AC023194.2-201ENST00000465398 406 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AC104339.1-201ENST00000465478 348 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AC008571.1-201ENST00000467232 300 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AC104109.1-201ENST00000498563 436 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 RNA5SP441-201ENST00000516809 88 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 DUX4L52-201ENST00000549363 777 ntBASIC6.28□□□□□ -1.4
LYSMD3Q7Z3D4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms