Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC023161.2-201ENST00000551218 780 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC024909.2-201ENST00000553035 286 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC053481.3-201ENST00000577881 843 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 BBIP1P1-201ENST00000602999 279 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 U73023.1-201ENST00000603134 700 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AP001981.2-201ENST00000603241 418 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC112187.2-201ENST00000604345 283 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC097468.3-201ENST00000607956 456 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 MIR6837-201ENST00000620884 64 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC055839.1-201ENST00000634467 498 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC025750.1-201ENST00000399891 379 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 SNORA11.5-201ENST00000408163 128 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 RN7SKP266-201ENST00000410232 287 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 RPL31P45-201ENST00000419532 356 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC108075.1-201ENST00000424692 529 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AL139148.1-201ENST00000427122 680 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 COX6CP13-201ENST00000428703 226 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 TRIM60P18-201ENST00000441518 828 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 RPL23AP33-201ENST00000442301 452 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 TAF9P1-201ENST00000445421 515 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 TAF9P2-201ENST00000454958 515 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC091180.1-201ENST00000462104 372 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC068724.1-201ENST00000487100 792 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC108693.1-201ENST00000496068 432 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 RNA5SP362-201ENST00000516048 118 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 Y_RNA.695-201ENST00000516715 107 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AP004247.1-201ENST00000531556 1289 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC007115.1-201ENST00000546853 234 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 OR6C7P-201ENST00000547875 934 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 DYNLL1P4-201ENST00000549314 266 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 SNORD95-201ENST00000579879 68 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AP001180.3-201ENST00000582221 145 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 BNIP3P23-201ENST00000599655 511 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AP005432.2-201ENST00000608162 586 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AL391497.1-201ENST00000608671 547 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC079395.2-201ENST00000610982 737 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC084782.3-201ENST00000612282 578 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC140113.4-201ENST00000622087 222 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
RNF220Q5VTB9 MTCO1P24-201ENST00000515438 1558 ntBASIC4.74□□□□□ -1.65
RNF220Q5VTB9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms