Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.02□□□□□ -1.77
RFX7Q2KHR2 RPL7P44-201ENST00000424827 742 ntBASIC4.02□□□□□ -1.77
RFX7Q2KHR2 HMGB3P10-201ENST00000434734 572 ntBASIC4.02□□□□□ -1.77
RFX7Q2KHR2 RSL24D1P3-201ENST00000449255 495 ntBASIC4.02□□□□□ -1.77
RFX7Q2KHR2 RPL7P23-201ENST00000493874 747 ntBASIC4.02□□□□□ -1.77
RFX7Q2KHR2 PTGES3P3-201ENST00000511479 482 ntBASIC4.02□□□□□ -1.77
RFX7Q2KHR2 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.02□□□□□ -1.77
RFX7Q2KHR2 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.02□□□□□ -1.77
RFX7Q2KHR2 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.02□□□□□ -1.77
RFX7Q2KHR2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.02□□□□□ -1.77
RFX7Q2KHR2 AL356321.1-201ENST00000621360 228 ntBASIC4.02□□□□□ -1.77
RFX7Q2KHR2 AC073476.4-201ENST00000628409 72 ntBASIC4.02□□□□□ -1.77
RFX7Q2KHR2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AL035425.3-201ENST00000564206 4996 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 CR382285.2-201ENST00000624662 1495 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 SNORA38.1-201ENST00000364172 131 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AL353705.1-201ENST00000433468 480 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AC127537.2-201ENST00000439258 465 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 Z99127.3-201ENST00000448158 395 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AL645939.1-201ENST00000453429 797 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AC087312.1-201ENST00000471411 480 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AC006445.1-201ENST00000491925 405 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AC090136.1-201ENST00000520009 240 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AC135001.1-201ENST00000544546 283 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 AC026422.1-201ENST00000623961 452 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 CR392039.4-201ENST00000624968 501 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 SPATA2P1-201ENST00000431223 2055 ntBASIC4.01□□□□□ -1.77
RFX7Q2KHR2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RFX7Q2KHR2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
RFX7Q2KHR2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RFX7Q2KHR2 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4□□□□□ -1.77
RFX7Q2KHR2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4□□□□□ -1.77
RFX7Q2KHR2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
RFX7Q2KHR2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4□□□□□ -1.77
RFX7Q2KHR2 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4□□□□□ -1.77
RFX7Q2KHR2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4□□□□□ -1.77
RFX7Q2KHR2 ETF1P3-201ENST00000430422 1160 ntBASIC4□□□□□ -1.77
RFX7Q2KHR2 RPL12P46-201ENST00000436610 195 ntBASIC4□□□□□ -1.77
RFX7Q2KHR2 AC022431.1-201ENST00000450941 438 ntBASIC4□□□□□ -1.77
RFX7Q2KHR2 RPL21P71-201ENST00000465598 459 ntBASIC4□□□□□ -1.77
RFX7Q2KHR2 CYCSP20-201ENST00000473154 315 ntBASIC4□□□□□ -1.77
RFX7Q2KHR2 AL136126.1-201ENST00000473603 402 ntBASIC4□□□□□ -1.77
RFX7Q2KHR2 AC092045.1-201ENST00000495716 1231 ntBASIC4□□□□□ -1.77
RFX7Q2KHR2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4□□□□□ -1.77
RFX7Q2KHR2 AC021678.1-201ENST00000505195 936 ntBASIC4□□□□□ -1.77
RFX7Q2KHR2 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4□□□□□ -1.77
RFX7Q2KHR2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4□□□□□ -1.77
RFX7Q2KHR2 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4□□□□□ -1.77
RFX7Q2KHR2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4□□□□□ -1.77
RFX7Q2KHR2 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4□□□□□ -1.77
RFX7Q2KHR2 AC017076.1-201ENST00000607613 578 ntBASIC4□□□□□ -1.77
RFX7Q2KHR2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4□□□□□ -1.77
RFX7Q2KHR2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4□□□□□ -1.77
RFX7Q2KHR2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 SNORA48.5-201ENST00000391143 135 ntBASIC3.99□□□□□ -1.77
RFX7Q2KHR2 AL034403.1-201ENST00000399414 885 ntBASIC3.99□□□□□ -1.77
RFX7Q2KHR2 SKINT1L-201ENST00000401057 817 ntBASIC3.99□□□□□ -1.77
RFX7Q2KHR2 GSTA8P-201ENST00000404253 637 ntBASIC3.99□□□□□ -1.77
RFX7Q2KHR2 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 NDUFS5P3-201ENST00000450668 321 ntBASIC3.99□□□□□ -1.77
RFX7Q2KHR2 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.99□□□□□ -1.77
RFX7Q2KHR2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 RPL23AP94-201ENST00000512518 302 ntBASIC3.99□□□□□ -1.77
RFX7Q2KHR2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.99□□□□□ -1.77
RFX7Q2KHR2 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.99□□□□□ -1.77
RFX7Q2KHR2 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 AC004024.1-201ENST00000549244 247 ntBASIC3.99□□□□□ -1.77
RFX7Q2KHR2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 MIR6852-201ENST00000621699 66 ntBASIC3.99□□□□□ -1.77
RFX7Q2KHR2 AC007496.3-201ENST00000624987 3443 ntBASIC3.99□□□□□ -1.77
RFX7Q2KHR2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.99□□□□□ -1.77
RFX7Q2KHR2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.98□□□□□ -1.77
RFX7Q2KHR2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms