Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.89□□□□□ -1.79
SCN1BQ07699 ABCF2P2-201ENST00000450549 296 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC091685.2-201ENST00000454924 864 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC104164.2-201ENST00000496953 495 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC025554.1-201ENST00000505641 188 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.89□□□□□ -1.79
SCN1BQ07699 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 RNA5SP73-201ENST00000516744 108 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.89□□□□□ -1.79
SCN1BQ07699 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.89□□□□□ -1.79
SCN1BQ07699 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.89□□□□□ -1.79
SCN1BQ07699 RPL23AP97-201ENST00000568955 471 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 MIR3912-201ENST00000577566 105 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 MIR3934-201ENST00000579806 107 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC090181.2-201ENST00000602975 672 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AL365400.2-201ENST00000605604 902 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC069545.1-201ENST00000605671 358 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AL159169.3-201ENST00000608871 561 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AL391834.2-201ENST00000609982 546 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AL158163.2-201ENST00000619110 700 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 MIR6853-201ENST00000619642 74 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC022306.3-201ENST00000619930 550 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC073342.3-201ENST00000624211 193 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC008785.1-201ENST00000624475 456 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC092184.1-201ENST00000625042 715 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 CR381572.1-201ENST00000625098 102 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.89□□□□□ -1.79
SCN1BQ07699 MKKS-204ENST00000639674 192 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC131971.1-201ENST00000332881 1482 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.89□□□□□ -1.79
SCN1BQ07699 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
SCN1BQ07699 Z82217.1-201ENST00000625157 8149 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.89□□□□□ -1.79
SCN1BQ07699 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCN1BQ07699 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SCN1BQ07699 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SCN1BQ07699 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.88□□□□□ -1.79
SCN1BQ07699 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.88□□□□□ -1.79
SCN1BQ07699 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SCN1BQ07699 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
SCN1BQ07699 AL590240.1-201ENST00000334118 313 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SCN1BQ07699 RNU5D-1-201ENST00000363299 116 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 RN7SKP103-201ENST00000363848 320 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.88□□□□□ -1.79
SCN1BQ07699 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SCN1BQ07699 RSL24D1P1-201ENST00000404972 493 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 RNA5SP113-201ENST00000410486 84 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 RNU2-37P-201ENST00000410695 177 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 RNU2-42P-201ENST00000410697 113 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 SNORA74C-2-201ENST00000411179 201 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AL139128.1-201ENST00000413921 941 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 Z75741.2-201ENST00000417272 1167 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.88□□□□□ -1.79
SCN1BQ07699 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.88□□□□□ -1.79
SCN1BQ07699 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.88□□□□□ -1.79
SCN1BQ07699 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.88□□□□□ -1.79
SCN1BQ07699 PSMD10P3-201ENST00000437000 448 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.88□□□□□ -1.79
SCN1BQ07699 VN1R10P-201ENST00000447106 875 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.88□□□□□ -1.79
SCN1BQ07699 RPS20P24-201ENST00000457473 361 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 PNPLA4P1-201ENST00000458328 305 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AC092757.1-201ENST00000467293 467 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 RPL31P13-201ENST00000484151 370 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AP001086.1-201ENST00000494882 321 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.88□□□□□ -1.79
SCN1BQ07699 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.88□□□□□ -1.79
SCN1BQ07699 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.88□□□□□ -1.79
SCN1BQ07699 AC113420.1-201ENST00000507903 571 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 NDUFB5P1-201ENST00000508134 564 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.88□□□□□ -1.79
SCN1BQ07699 RNU6-1073P-201ENST00000517182 106 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.88□□□□□ -1.79
SCN1BQ07699 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SCN1BQ07699 AP001207.2-201ENST00000519490 539 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AC087808.1-201ENST00000520501 361 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SCN1BQ07699 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.88□□□□□ -1.79
SCN1BQ07699 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.88□□□□□ -1.79
SCN1BQ07699 TRAV15-201ENST00000556680 249 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 MTND3P13-201ENST00000574391 343 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 LARP7P2-201ENST00000575306 125 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.88□□□□□ -1.79
SCN1BQ07699 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.88□□□□□ -1.79
SCN1BQ07699 VN1R83P-201ENST00000595685 445 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AL512782.1-201ENST00000603093 364 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AC133644.2-201ENST00000608142 540 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.88□□□□□ -1.79
SCN1BQ07699 AC068870.2-201ENST00000620635 389 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms