Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL16A1Q07092 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL16A1Q07092 AC004552.1-201ENST00000419089 348 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.28□□□□□ -1.72
COL16A1Q07092 FTLP19-201ENST00000433300 394 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.28□□□□□ -1.72
COL16A1Q07092 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.28□□□□□ -1.72
COL16A1Q07092 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.28□□□□□ -1.72
COL16A1Q07092 OR4C2P-201ENST00000530855 1064 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
COL16A1Q07092 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.28□□□□□ -1.72
COL16A1Q07092 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.28□□□□□ -1.72
COL16A1Q07092 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.28□□□□□ -1.72
COL16A1Q07092 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.28□□□□□ -1.72
COL16A1Q07092 AL391262.2-201ENST00000622466 494 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.28□□□□□ -1.72
COL16A1Q07092 AC243829.7-201ENST00000633081 225 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 MIR622-201ENST00000638396 96 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
COL16A1Q07092 AL513302.2-201ENST00000562313 1842 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL16A1Q07092 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL16A1Q07092 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL16A1Q07092 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.28□□□□□ -1.72
COL16A1Q07092 AC007342.9-201ENST00000623877 1385 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL16A1Q07092 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL16A1Q07092 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL16A1Q07092 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
COL16A1Q07092 AL672167.1-206ENST00000356293 943 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL16A1Q07092 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.28□□□□□ -1.72
COL16A1Q07092 MIR504-201ENST00000385065 83 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 AL513174.1-201ENST00000423182 629 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 AL603825.1-201ENST00000438481 80 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 AC017099.1-201ENST00000448261 1028 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 AC087312.1-201ENST00000471411 480 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 AC012123.2-201ENST00000485809 248 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 AC034159.1-201ENST00000513885 583 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 SETP12-201ENST00000514068 805 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 AP001207.2-201ENST00000519490 539 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL16A1Q07092 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.28□□□□□ -1.72
COL16A1Q07092 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.28□□□□□ -1.72
COL16A1Q07092 AP000720.1-201ENST00000625091 483 ntBASIC4.28□□□□□ -1.72
COL16A1Q07092 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
COL16A1Q07092 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL16A1Q07092 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
COL16A1Q07092 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.27□□□□□ -1.73
COL16A1Q07092 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
COL16A1Q07092 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL16A1Q07092 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.27□□□□□ -1.73
COL16A1Q07092 RPS24P12-201ENST00000402084 394 ntBASIC4.27□□□□□ -1.73
COL16A1Q07092 MTND3P20-201ENST00000407663 186 ntBASIC4.27□□□□□ -1.73
COL16A1Q07092 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.27□□□□□ -1.73
COL16A1Q07092 AL645937.1-202ENST00000421799 937 ntBASIC4.27□□□□□ -1.73
COL16A1Q07092 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.27□□□□□ -1.73
COL16A1Q07092 RSL24D1P2-201ENST00000445584 366 ntBASIC4.27□□□□□ -1.73
COL16A1Q07092 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.27□□□□□ -1.73
COL16A1Q07092 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.27□□□□□ -1.73
COL16A1Q07092 AC009097.3-201ENST00000563557 1018 ntBASIC4.27□□□□□ -1.73
COL16A1Q07092 AC106734.1-201ENST00000568646 663 ntBASIC4.27□□□□□ -1.73
COL16A1Q07092 AC026790.2-201ENST00000606282 430 ntBASIC4.27□□□□□ -1.73
COL16A1Q07092 AC099506.2-201ENST00000623074 221 ntBASIC4.27□□□□□ -1.73
COL16A1Q07092 AL118508.4-201ENST00000624142 1176 ntBASIC4.27□□□□□ -1.73
COL16A1Q07092 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.27□□□□□ -1.73
COL16A1Q07092 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL16A1Q07092 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
COL16A1Q07092 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
COL16A1Q07092 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
COL16A1Q07092 AC096644.4-201ENST00000563417 2912 ntBASIC4.26□□□□□ -1.73
COL16A1Q07092 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL16A1Q07092 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL16A1Q07092 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL16A1Q07092 RNU6-283P-201ENST00000364788 107 ntBASIC4.26□□□□□ -1.73
COL16A1Q07092 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.26□□□□□ -1.73
COL16A1Q07092 AC012065.2-201ENST00000421295 375 ntBASIC4.26□□□□□ -1.73
COL16A1Q07092 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.26□□□□□ -1.73
COL16A1Q07092 HMGB1P18-201ENST00000438801 619 ntBASIC4.26□□□□□ -1.73
COL16A1Q07092 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.26□□□□□ -1.73
COL16A1Q07092 snoU13.26-201ENST00000459452 105 ntBASIC4.26□□□□□ -1.73
COL16A1Q07092 AC111000.5-201ENST00000506559 1178 ntBASIC4.26□□□□□ -1.73
COL16A1Q07092 RNU6-551P-201ENST00000516661 103 ntBASIC4.26□□□□□ -1.73
COL16A1Q07092 AC105036.1-201ENST00000566222 271 ntBASIC4.26□□□□□ -1.73
COL16A1Q07092 AC090971.4-201ENST00000560291 1800 ntBASIC4.26□□□□□ -1.73
COL16A1Q07092 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
COL16A1Q07092 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL16A1Q07092 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL16A1Q07092 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL16A1Q07092 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.25□□□□□ -1.73
COL16A1Q07092 RHOT1P2-201ENST00000366423 333 ntBASIC4.25□□□□□ -1.73
COL16A1Q07092 RPS26P47-201ENST00000427219 348 ntBASIC4.25□□□□□ -1.73
COL16A1Q07092 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.25□□□□□ -1.73
COL16A1Q07092 AC007563.3-201ENST00000433233 371 ntBASIC4.25□□□□□ -1.73
COL16A1Q07092 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.25□□□□□ -1.73
COL16A1Q07092 AC016696.1-201ENST00000446949 318 ntBASIC4.25□□□□□ -1.73
COL16A1Q07092 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COL16A1Q07092 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.25□□□□□ -1.73
COL16A1Q07092 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.25□□□□□ -1.73
COL16A1Q07092 RPS26P3-201ENST00000470205 348 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms