Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CCL20P78556 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.65□□□□□ -1.99
CCL20P78556 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCL20P78556 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCL20P78556 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.64□□□□□ -1.99
CCL20P78556 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCL20P78556 AL079305.1-201ENST00000623159 3008 ntBASIC2.64□□□□□ -1.99
CCL20P78556 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCL20P78556 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCL20P78556 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCL20P78556 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.64□□□□□ -1.99
CCL20P78556 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CCL20P78556 SNORA51.1-201ENST00000363243 140 ntBASIC2.64□□□□□ -1.99
CCL20P78556 RNU6-670P-201ENST00000364312 104 ntBASIC2.64□□□□□ -1.99
CCL20P78556 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.64□□□□□ -1.99
CCL20P78556 RNU6-213P-201ENST00000384051 104 ntBASIC2.64□□□□□ -1.99
CCL20P78556 DNAJC19P6-201ENST00000401853 280 ntBASIC2.64□□□□□ -1.99
CCL20P78556 AL590290.1-201ENST00000405336 380 ntBASIC2.64□□□□□ -1.99
CCL20P78556 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCL20P78556 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.64□□□□□ -1.99
CCL20P78556 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.64□□□□□ -1.99
CCL20P78556 BX510359.3-201ENST00000422168 306 ntBASIC2.64□□□□□ -1.99
CCL20P78556 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCL20P78556 MTCO1P43-201ENST00000431831 488 ntBASIC2.64□□□□□ -1.99
CCL20P78556 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.64□□□□□ -1.99
CCL20P78556 TPTE2P6-202ENST00000445572 1007 ntBASIC2.64□□□□□ -1.99
CCL20P78556 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.64□□□□□ -1.99
CCL20P78556 AC108860.1-201ENST00000484521 383 ntBASIC2.64□□□□□ -1.99
CCL20P78556 NCOR1P1-202ENST00000486162 291 ntBASIC2.64□□□□□ -1.99
CCL20P78556 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCL20P78556 RN7SL323P-201ENST00000494712 295 ntBASIC2.64□□□□□ -1.99
CCL20P78556 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.64□□□□□ -1.99
CCL20P78556 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.64□□□□□ -1.99
CCL20P78556 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.64□□□□□ -1.99
CCL20P78556 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.64□□□□□ -1.99
CCL20P78556 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCL20P78556 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.64□□□□□ -1.99
CCL20P78556 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC2.64□□□□□ -1.99
CCL20P78556 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.64□□□□□ -1.99
CCL20P78556 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.64□□□□□ -1.99
CCL20P78556 OR6C73P-201ENST00000546432 358 ntBASIC2.64□□□□□ -1.99
CCL20P78556 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.64□□□□□ -1.99
CCL20P78556 AC023158.1-201ENST00000561632 1025 ntBASIC2.64□□□□□ -1.99
CCL20P78556 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.64□□□□□ -1.99
CCL20P78556 MIR4506-201ENST00000584693 77 ntBASIC2.64□□□□□ -1.99
CCL20P78556 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC2.64□□□□□ -1.99
CCL20P78556 ZNF92P3-201ENST00000596594 954 ntBASIC2.64□□□□□ -1.99
CCL20P78556 HMGN2P28-201ENST00000606102 262 ntBASIC2.64□□□□□ -1.99
CCL20P78556 MIR6867-201ENST00000610636 67 ntBASIC2.64□□□□□ -1.99
CCL20P78556 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.64□□□□□ -1.99
CCL20P78556 FP236240.3-201ENST00000623061 327 ntBASIC2.64□□□□□ -1.99
CCL20P78556 AC084035.1-201ENST00000634543 607 ntBASIC2.64□□□□□ -1.99
CCL20P78556 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.64□□□□□ -1.99
CCL20P78556 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCL20P78556 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CCL20P78556 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
CCL20P78556 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CCL20P78556 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCL20P78556 BRAFP1-201ENST00000445336 2703 ntBASIC2.63□□□□□ -1.99
CCL20P78556 AC123912.3-201ENST00000600907 1367 ntBASIC2.63□□□□□ -1.99
CCL20P78556 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCL20P78556 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.63□□□□□ -1.99
CCL20P78556 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CCL20P78556 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.63□□□□□ -1.99
CCL20P78556 SNORA46-201ENST00000384762 135 ntBASIC2.63□□□□□ -1.99
CCL20P78556 RN7SKP123-201ENST00000410732 291 ntBASIC2.63□□□□□ -1.99
CCL20P78556 LINC01881-201ENST00000416103 412 ntBASIC2.63□□□□□ -1.99
CCL20P78556 AL356095.1-201ENST00000417217 199 ntBASIC2.63□□□□□ -1.99
CCL20P78556 HMGB1P45-201ENST00000435986 653 ntBASIC2.63□□□□□ -1.99
CCL20P78556 RRM2P4-201ENST00000441721 562 ntBASIC2.63□□□□□ -1.99
CCL20P78556 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.63□□□□□ -1.99
CCL20P78556 ST13P14-201ENST00000474095 734 ntBASIC2.63□□□□□ -1.99
CCL20P78556 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.63□□□□□ -1.99
CCL20P78556 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.63□□□□□ -1.99
CCL20P78556 AC005351.1-201ENST00000511152 786 ntBASIC2.63□□□□□ -1.99
CCL20P78556 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC2.63□□□□□ -1.99
CCL20P78556 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.63□□□□□ -1.99
CCL20P78556 AP002812.4-201ENST00000532139 286 ntBASIC2.63□□□□□ -1.99
CCL20P78556 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.63□□□□□ -1.99
CCL20P78556 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.63□□□□□ -1.99
CCL20P78556 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC2.63□□□□□ -1.99
CCL20P78556 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.63□□□□□ -1.99
CCL20P78556 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.63□□□□□ -1.99
CCL20P78556 AC009303.3-201ENST00000591103 736 ntBASIC2.63□□□□□ -1.99
CCL20P78556 OR7E18P-201ENST00000592589 702 ntBASIC2.63□□□□□ -1.99
CCL20P78556 AC135803.1-201ENST00000608748 565 ntBASIC2.63□□□□□ -1.99
CCL20P78556 AL354976.1-201ENST00000613843 387 ntBASIC2.63□□□□□ -1.99
CCL20P78556 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCL20P78556 U6.48-201ENST00000618523 106 ntBASIC2.63□□□□□ -1.99
CCL20P78556 AC069209.1-201ENST00000619282 651 ntBASIC2.63□□□□□ -1.99
CCL20P78556 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.63□□□□□ -1.99
CCL20P78556 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCL20P78556 MAPK10-362ENST00000641864 4484 ntBASIC2.63□□□□□ -1.99
CCL20P78556 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.62□□□□□ -1.99
CCL20P78556 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCL20P78556 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.62□□□□□ -1.99
CCL20P78556 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCL20P78556 RNA5SP119-201ENST00000362715 117 ntBASIC2.62□□□□□ -1.99
CCL20P78556 SNORA51.4-201ENST00000364993 124 ntBASIC2.62□□□□□ -1.99
CCL20P78556 MIR105-2-201ENST00000385083 81 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms