Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC133555.2-201ENST00000550213 292 ntBASIC2.05□□□□□ -2.08
RPS28P62857 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.05□□□□□ -2.08
RPS28P62857 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
RPS28P62857 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC2.05□□□□□ -2.08
RPS28P62857 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.05□□□□□ -2.08
RPS28P62857 AC022726.1-201ENST00000587475 207 ntBASIC2.05□□□□□ -2.08
RPS28P62857 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.05□□□□□ -2.08
RPS28P62857 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC2.05□□□□□ -2.08
RPS28P62857 DPRXP5-201ENST00000604662 539 ntBASIC2.05□□□□□ -2.08
RPS28P62857 AC015982.1-201ENST00000608113 465 ntBASIC2.05□□□□□ -2.08
RPS28P62857 MIR7847-201ENST00000610912 103 ntBASIC2.05□□□□□ -2.08
RPS28P62857 AL021997.2-201ENST00000615674 271 ntBASIC2.05□□□□□ -2.08
RPS28P62857 AC004801.6-201ENST00000616571 978 ntBASIC2.05□□□□□ -2.08
RPS28P62857 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RPS28P62857 DLST-216ENST00000626051 252 ntTSL 5 BASIC2.05□□□□□ -2.08
RPS28P62857 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RPS28P62857 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC2.05□□□□□ -2.08
RPS28P62857 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RPS28P62857 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RPS28P62857 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RPS28P62857 RNA5SP175-201ENST00000364275 119 ntBASIC2.04□□□□□ -2.08
RPS28P62857 RN7SKP76-201ENST00000364419 323 ntBASIC2.04□□□□□ -2.08
RPS28P62857 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RPS28P62857 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RPS28P62857 OR52E6-202ENST00000379946 954 ntBASIC2.04□□□□□ -2.08
RPS28P62857 MIR181B1-201ENST00000385240 110 ntBASIC2.04□□□□□ -2.08
RPS28P62857 SOD2P1-201ENST00000396543 562 ntBASIC2.04□□□□□ -2.08
RPS28P62857 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RPS28P62857 SSXP10-201ENST00000402595 565 ntBASIC2.04□□□□□ -2.08
RPS28P62857 RN7SKP267-201ENST00000410381 285 ntBASIC2.04□□□□□ -2.08
RPS28P62857 RPL7AP73-201ENST00000413490 353 ntBASIC2.04□□□□□ -2.08
RPS28P62857 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC2.04□□□□□ -2.08
RPS28P62857 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 RPL36P19-201ENST00000430744 301 ntBASIC2.04□□□□□ -2.08
RPS28P62857 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RPS28P62857 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RPS28P62857 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RPS28P62857 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 AC097499.1-201ENST00000444277 208 ntBASIC2.04□□□□□ -2.08
RPS28P62857 HMGN1P36-201ENST00000446623 298 ntBASIC2.04□□□□□ -2.08
RPS28P62857 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC2.04□□□□□ -2.08
RPS28P62857 RPS3AP53-201ENST00000454716 778 ntBASIC2.04□□□□□ -2.08
RPS28P62857 Z92846.1-201ENST00000456203 268 ntBASIC2.04□□□□□ -2.08
RPS28P62857 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC2.04□□□□□ -2.08
RPS28P62857 NAP1L1P3-201ENST00000462291 880 ntBASIC2.04□□□□□ -2.08
RPS28P62857 RN7SL263P-201ENST00000467969 290 ntBASIC2.04□□□□□ -2.08
RPS28P62857 RN7SL145P-201ENST00000469955 296 ntBASIC2.04□□□□□ -2.08
RPS28P62857 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.04□□□□□ -2.08
RPS28P62857 AC084198.1-201ENST00000477747 402 ntBASIC2.04□□□□□ -2.08
RPS28P62857 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 AC135721.1-201ENST00000497954 479 ntBASIC2.04□□□□□ -2.08
RPS28P62857 NENFP3-201ENST00000503735 313 ntBASIC2.04□□□□□ -2.08
RPS28P62857 AC002456.2-201ENST00000509356 380 ntBASIC2.04□□□□□ -2.08
RPS28P62857 SNORA31.11-201ENST00000516528 139 ntBASIC2.04□□□□□ -2.08
RPS28P62857 RNA5SP422-201ENST00000516778 111 ntBASIC2.04□□□□□ -2.08
RPS28P62857 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC2.04□□□□□ -2.08
RPS28P62857 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 AC135983.3-201ENST00000528049 1226 ntBASIC2.04□□□□□ -2.08
RPS28P62857 WARSP1-201ENST00000533936 454 ntBASIC2.04□□□□□ -2.08
RPS28P62857 AP001880.2-201ENST00000538233 448 ntBASIC2.04□□□□□ -2.08
RPS28P62857 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.04□□□□□ -2.08
RPS28P62857 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.04□□□□□ -2.08
RPS28P62857 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC2.04□□□□□ -2.08
RPS28P62857 AC006130.2-201ENST00000586202 326 ntBASIC2.04□□□□□ -2.08
RPS28P62857 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC2.04□□□□□ -2.08
RPS28P62857 AL031429.2-201ENST00000602605 649 ntBASIC2.04□□□□□ -2.08
RPS28P62857 HSPE1P7-201ENST00000604681 321 ntBASIC2.04□□□□□ -2.08
RPS28P62857 AC106028.5-201ENST00000610332 395 ntBASIC2.04□□□□□ -2.08
RPS28P62857 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
RPS28P62857 AC007546.1-201ENST00000619452 559 ntBASIC2.04□□□□□ -2.08
RPS28P62857 WWOX-217ENST00000620008 450 ntTSL 2 BASIC2.04□□□□□ -2.08
RPS28P62857 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RPS28P62857 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
RPS28P62857 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC2.03□□□□□ -2.08
RPS28P62857 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.03□□□□□ -2.08
RPS28P62857 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RPS28P62857 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC2.03□□□□□ -2.08
RPS28P62857 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RPS28P62857 AC016716.1-201ENST00000265882 708 ntBASIC2.03□□□□□ -2.08
RPS28P62857 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RPS28P62857 MIR133B-201ENST00000362210 119 ntBASIC2.03□□□□□ -2.08
RPS28P62857 OR6K3-202ENST00000368146 996 ntBASIC2.03□□□□□ -2.08
RPS28P62857 RNU6-339P-201ENST00000384310 107 ntBASIC2.03□□□□□ -2.08
RPS28P62857 MIR524-201ENST00000385242 87 ntBASIC2.03□□□□□ -2.08
RPS28P62857 AL590004.2-201ENST00000404787 371 ntBASIC2.03□□□□□ -2.08
RPS28P62857 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.03□□□□□ -2.08
RPS28P62857 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RPS28P62857 RNU4-25P-201ENST00000410569 230 ntBASIC2.03□□□□□ -2.08
RPS28P62857 RNU6-193P-201ENST00000410977 107 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms